TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CTCTCCTTTCTTCAGAGAAATACAGTTGGACTGGACAATTATCTGGTTAT
GGGACTAAGCCTCAGGAAGCCAGGTTCTTAAACTATGCTAAAGATATAAA
AGGATTATTTTACTAATCATTTTATTTGTTTACATTTCAAATAGCTCCCT
TCCCAGTTACCCATCCACAAAACCCCATCTCATCCCTCCCCTCTCTCCTC
CCCTTGGCCTCTATGAGGGTGCTCCTCCACCTACTCACCCACTCCTGTCT
CACTGCTTTAGCATCCCCTATGCTGTGGCATCAAGCCTCCACAGGACCAA
GGGTCTCCAGAATTGTTTCTTCCTTCTTCTTCTTCTTCTTCTTCTTCTTC
TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT
CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTCTTCTTCTT
TTTTTTTTAGATAATTCTCCTTTCTAGAATGCCTACTCCCTCAAGCAGTT
CCTGTGAGGTACCCTGAGGTTTTTCTGTGTCTGTGGGAATATTTGGGGTC
TGAATAAGAAACTTGGCATTTTCCTTCTTTTCCGCCATTCTTTATTGGAC
GGTGCCAGAGCCCAAGGGGGTTCTCCCTGGAACCAGGCTTTCTTCCTCCT
TCCCCGAAAATCCCCCCCCCCCCATGGAGCCCCA

GCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXAGTCAGGTTTCCAAAATGTAAGTATCTAT
AGAGTCAGGCGAAGTTTCCAATAAGGGGACTGCATAAATATCTTGAAAGG
AAACCACAGAAAATTTGTCAGGGAGGAATTCAAGAATAATTCTCTAGTAG
AGAAATGCCAATTATTTAAAAGAAGTATGTGTTTCAAAGGTTAACACATT
AGCACTTCTCATTTAGCCCTTGTGATTAAGGAAACAGCCAGGAGTAGTGA
TGTACATCCAAAATCCCAGCACTCAGAGGGCGGGCCAGCAGACCTGGGAG
TCCAGTGAGACTCTCCCACAAGGAAAAGTAAAAACAAAAACAAAGCCTGA
ATATGATACTGAGGTAGGTTAAGGGACCTATCTGTGCATTACTTGCTGTG
ATATCATGAACTATGATGTCCTCATGCCTCAGTTTTTACAACTGTAGAGA
CATGACATAGTAGGTATATTAATATCAATGAGTAAACAACATTAAGCACA
GTATGGGTTCATTAGAATAATTAGATGCAGTAATTCCTTTTCTGTATTTT
ATGTGTTCTTAGCAGTCATATTTTCAGAGGTGTAGGTATGTGAAGACCTA
CCCTAAAGAGACTTCAGAGACAGTCTTNCATATAACCATTAGTATAGTCC
AAATACATCAGGAGACTGAGATGTANATAAGAAGGAAGATTAGTGGGC

Query= MSMg01no383_n07.g1 MSMg01no383_n07.g1 CHROMAT_FILE:
MSMg01no383_n07.g1 PHD_FILE: MSMg01no383_n07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:59 2005
         (559 letters)



>mm_chr1_102289063_102290021
          Length = 959

 Score = 1042 bits (539), Expect = 0.0
 Identities = 554/559 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   agtcaggtttccaaaatgtaagtatctatagagtcaggcgaagtttccaataaggggact 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 agtcaggtttccaaaatgtaagtatctatagagtcaggcgaagtttccaataaggggact 700

                                                                       
Query: 61  gcataaatatcttgaaaggaaaccacagaaaatttgtcagggaggaattcaagaataatt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 gcataaatatcttgaaaggaaaccacagaaaatttgtcagggaggaattcaagaataatt 640

                                                                       
Query: 121 ctctagtagagaaatgccaattatttaaaagaagtatgtgtttcaaaggttaacacatta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 ctctagtagagaaatgccaattatttaaaagaagtatgtgtttcaaaggttaacacatta 580

                                                                       
Query: 181 gcacttctcatttagcccttgtgattaaggaaacagccaggagtagtgatgtacatccaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 gcacttctcatttagcccttgtgattaaggaaacagccaggagtagtgatgtacatccaa 520

                                                                       
Query: 241 aatcccagcactcagagggcgggccagcagacctgggagtccagtgagactctcccacaa 300
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 aatcccagcactcagagggtgggccagcagacctgggagtccagtgagactctcccacaa 460

                                                                       
Query: 301 ggaaaagtaaaaacaaaaacaaagcctgaatatgatactgaggtaggttaagggacctat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 ggaaaagtaaaaacaaaaacaaagcctgaatatgatactgaggtaggttaagggacctat 400

                                                                       
Query: 361 ctgtgcattacttgctgtgatatcatgaactatgatgtcctcatgcctcagtttttacaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 399 ctgtgcattacttgctgtgatatcatgaactatgatgtcctcatgcctcagtttttaaaa 340

                                                                       
Query: 421 ctgtagagacatgacatagtaggtatattaatatcaatgagtaaacaacattaagcacag 480
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 339 ctgtagagacatgacatagtaggtatattaatatcaatgagtaaacaacattaaacacag 280

                                                                       
Query: 481 tatgggttcattagaataattagatgcagtaattccttttctgtattttatgtgttctta 540
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 279 tatgggctcattagaataattagatgcagtaattccttttctgtattttatgtgttcttg 220

                              
Query: 541 gcagtcatattttcagagg 559
           |||||||||||||||||||
Sbjct: 219 gcagtcatattttcagagg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 559
Length of database: 959
Length adjustment: 10
Effective length of query: 549
Effective length of database: 949
Effective search space:   521001
Effective search space used:   521001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)