XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTCACCTGAG
GAATACCATATGGATGAGAAGCACCTGAAAAAATGTTCAACATCCTTAAT
CATCAGGGAAATGCAAATCAAACCAACCCTGAGATTCCACCTCACACCAG
TCAAAATGGCTAAGATGAAAAATTCAGGTGACAGCAGATGCTGGCGAGGA
TGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATTGCAAGCTTGT
ACAACCACTCTGGAAATCAGTTAGGCGGTTCCTCAGAAAATTGGACATTG
TACTACAGGAGGATCCCGAAATACCTCTCCTGGGCATATGTCCAGAAGAT
GTCCCAACCGGTAAGAAGGACACATGCTCCACTATGTTCATAGCAGCCTT
TTTTATAATAGCCAGAGCTGGAAAGAACCCAGATGCCCCTCAACAAAGGA
ATGGATACAGAAAATGTGGTACATTTACACAATGGAGTACTACTCAGCTA
TTAAAAAAATGAATTTATGAAATTCCTAGGCAAATGGATGTACCTGGAGG
GCATCATCCTGAGTGAGGAACACATTCCCAAAGGAACTCACCCATATGTA
CTCCCCTGATAAGGGATATTANCCTGAAACCTCGATACCCCCGAAATAGA
AACAATTTGCTAAATGCTTGAATTCCAGAGAAAAGAGAACAAATTGGGAA
ACTTTGCCCCTCTTTAAATGGGACAAAACCCCCTGCGAGGGTTCCGAAAA
AAATTGGATTGGGCCAAG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXTTTCCATATTTTGCCATGGGCTTTATAATTTTATCTTTTG
GAAAAAGACTGCAGTGGTCTATTAGAACCCAGAGTCGAGCCTCTGCTCTA
TAATTCCAGGATTGTATTGAAACTAATTTTGATTTCCAATATTTATATAT
GATTTTTTAATATTATATATTTGAAAAACTTCAAGTCTCATAAAATCTGA
ATCCATCTCAGTATTAACCATAAGCTACATTCTTATTTAAAAGTTCAACA
GTATGTAGAAATAGAATTTAAAAGATCTACATATGTAGAAGTAAAAGTTG
TTTGACATTTTTGAAATGATTACTCATGGTGTGCTTTATGGAATCACTTC
ACAAAAATATAATTTAACATTAAGAGGAGGAAAGGTCATACACTGTAAAA
CTAAGTTGACTTCTTTTACTTCGCCTGTTTTCGACAAAGGCCTTAGTTGT
ATTAAAAGAGATACTTGGAAGAGACACTTGAGGAGAAGAAAAGTACATAA
ATCACCCTGATTTGGCATAGCTTCCTGTTGGGACATTTAAAGAACCAACA
AAAGCCAATGTAAGGGAGAAATAATATATTTTAACTTTATAGTTCAGGAA
TGGAGTCAATCCTGACGGAGAATCCTATCCCTATGTAGCTGATAGAGGAG
TTTTCCTCTCCTTCCACTCCGTTAGGTGGGAAACAAATGAACGGTTGGTT
TTGGTTCCCCN

Query= MSMg01no384_a22.g1 MSMg01no384_a22.g1 CHROMAT_FILE:
MSMg01no384_a22.g1 PHD_FILE: MSMg01no384_a22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:16 2005
         (506 letters)



>mm_chr1_114845768_114846673
          Length = 906

 Score =  924 bits (478), Expect = 0.0
 Identities = 499/506 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttccatattttgccatgggctttataattttatcttttggaaaaagactgcagtggtct 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 201 tttccatattttgccatgggctttataattttatcttttggaaaaagactgcggtggcct 260

                                                                       
Query: 61  attagaacccagagtcgagcctctgctctataattccaggattgtattgaaactaatttt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attagaacccagagtcgagcctctgctctataattccaggattgtattgaaactaatttt 320

                                                                       
Query: 121 gatttccaatatttatatatgattttttaatattatatatttgaaaaacttcaagtctca 180
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gatttccaatatttgtatatgattttttaatattatatatttgaaaaacttcaagtctca 380

                                                                       
Query: 181 taaaatctgaatccatctcagtattaaccataagctacattcttatttaaaagttcaaca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taaaatctgaatccatctcagtattaaccataagctacattcttatttaaaagttcaaca 440

                                                                       
Query: 241 gtatgtagaaatagaatttaaaagatctacatatgtagaagtaaaagttgtttgacattt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtatgtagaaatagaatttaaaagatctacatatgtagaagtaaaagttgtttgacattt 500

                                                                       
Query: 301 ttgaaatgattactcatggtgtgctttatggaatcacttcacaaaaatataatttaacat 360
           ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||
Sbjct: 501 ttgaaatgattactcatggtgtggtttatggaatcacctcacaaaaatataatttaacat 560

                                                                       
Query: 361 taagaggaggaaaggtcatacactgtaaaactaagttgacttcttttacttcgcctgttt 420
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 561 taagaggaggaaaggtcatacactgtaaaactaagttgacttcttttccttcgcctgttt 620

                                                                       
Query: 421 tcgacaaaggccttagttgtattaaaagagatacttggaagagacacttgaggagaagaa 480
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttgacaaaggccttagttgtattaaaagagatacttggaagagacacttgaggagaagaa 680

                                     
Query: 481 aagtacataaatcaccctgatttggc 506
           ||||||||||||||||||||||||||
Sbjct: 681 aagtacataaatcaccctgatttggc 706


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 506
Length of database: 906
Length adjustment: 10
Effective length of query: 496
Effective length of database: 896
Effective search space:   444416
Effective search space used:   444416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)