Query= MSMg01no384_c05.b1 MSMg01no384_c05.b1 CHROMAT_FILE:
MSMg01no384_c05.b1 PHD_FILE: MSMg01no384_c05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:22 2005
(522 letters)
>mm_chr1_163920038_163920955
Length = 918
Score = 967 bits (500), Expect = 0.0
Identities = 512/518 (98%), Gaps = 4/518 (0%)
Strand = Plus / Plus
Query: 5 gaattcagaggatgaagcaaagggggcgctgaaaggagggatttgtggggagacctcatt 64
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagaggaagaagcaaagggggcgctgaaaggagggatttgtggggagacctcatt 264
Query: 65 gcccacgagttgtttgattataaacatttgcttaatgtatgtttttttttttcatttagt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gcccacgagttgtttgattataaacatttgcttaatgtatgtttttttttttcatttagt 324
Query: 125 tgggacactgttttcaaagacaatgtgcatgtcttatacgagttccattcacgatttttt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 325 tgggacactgttttcaaagacaatgtgcatgtcttatacgagttccattcacggtttttt 384
Query: 185 tttcaacagggaaaaaaatttagagacattagagctcttctatgtcacttaaaggttgaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tttcaacagggaaaaaaatttagagacattagagctcttctatgtcacttaaaggttgaa 444
Query: 245 aaatacccctttgtatgttgcatgttctctaatttttgccaattaaaagtgggatctaac 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aaatacccctttgtatgttgcatgttctctaatttttgccaattaaaagtgggatctaac 504
Query: 305 ccattagaataagttcaatgcagtggcatttcacttggaaaaaaaaagaaactttttaaa 364
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 505 ccattagaataagttcaatgcagtggcatttcacttggaaaaaaaaa----ctttttaaa 560
Query: 365 ataatggttaaaagtttttacatcatattttatagccacttgcttcgggtagaaactgca 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ataatggttaaaagtttttacatcatattttatagccacttgcttcgggtagaaactgca 620
Query: 425 caggaaattaaagtgaagtttgcatacaaatcatgttgactgccttcaaaaggagatgtt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 caggaaattaaagtgaagtttgcatacaaatcatgttgactgccttcaaaaggagatgtt 680
Query: 485 gcagttagtaaaacctgatttacctttgtgattatgga 522
||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gcagttagtaaaacctgatttacctttgtgattatgga 718
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 522
Length of database: 918
Length adjustment: 10
Effective length of query: 512
Effective length of database: 908
Effective search space: 464896
Effective search space used: 464896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no384_c05.g1 MSMg01no384_c05.g1 CHROMAT_FILE:
MSMg01no384_c05.g1 PHD_FILE: MSMg01no384_c05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:22 2005
(465 letters)
>mm_chr1_164093114_164093978
Length = 865
Score = 868 bits (449), Expect = 0.0
Identities = 461/465 (99%)
Strand = Plus / Minus
Query: 1 ctggtgagctagcgagggtaaatgcattgaagaaagattggtcaagtagcaaagtaaggg 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 665 ctggtgagctagcgagggtaaatgcattgaagaaagagtggtcaagtagcaaagtaaggg 606
Query: 61 ctatcaattatgcgattctcaaattctcccttccctagcagtttccatatcctttctgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 ctatcaattatgcgattctcaaattctcccttccctagcagtttccatatcctttctgga 546
Query: 121 agctggcaagccactcggtgcctggtatcagtgccatctcagctagacggcacgtccagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 agctggcaagccactcggtgcctggtatcagtgccatctcagctagacggcacgtccagg 486
Query: 181 ccagccactgctactgggagattccttcctgcacagtcagatgagccagtggtcaggaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 ccagccactgctactgggagattccttcctgcacagtcagatgagccagtggtcaggaat 426
Query: 241 tccgaagttcctcaataaagctggtgtgtgtctcctgttgatgtgtgatcactggacaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 tccgaagttcctcaataaagctggtgtgtgtctcctgttgatgtgtgatcactggacaca 366
Query: 301 cttcatgtgatgggaaatgaagacttttctatcttcgctctgcagaagagagaagctgtc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 cttcatgtgatgggaaatgaagacttttctatcttcgctctgcagaagagagaagctgtc 306
Query: 361 tctcatcttagaactgggcgcctcaccgaagtgatgtggccctttgtgagcaccccattt 420
|||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 cctcatcctagaactgggagcctcaccgaagtgatgtggccctttgtgagcaccccattt 246
Query: 421 cccaagtggtccatagcttatgtgtgtgggagtgaatgccatgca 465
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 cccaagtggtccatagcttatgtgtgtgggagtgaatgccatgca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 465
Length of database: 865
Length adjustment: 10
Effective length of query: 455
Effective length of database: 855
Effective search space: 389025
Effective search space used: 389025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
