XXXXXXXXXXXXXXXXXXXXXXXXXTCCCAGAGGATCCGCGGAATTCATT
GTTTTCAATAGCTGAGTAGTACTCCATTGTGTAAATGTACCACATTTTCT
GTATCCATTCCTTTGTTGATGGACATCTGGGTTCTTTCCAGCCTCTGGCT
ATTATAAATGAGGCTGCTATGAACATAGTGGAGCATGTGTCCTTATTACA
AGTTGGAGCATCTTCTGGGTATATGCCCAGGAGTGATATTGCTGGATCTT
CTGGTAGAACTATGTCCAATTTTCTGAGGAATCACCAAACCGATTTCCAG
AATGGTTGTACCAGCTTGCAACCCCACCAGCAATGTAGGAGTGTTCCTCT
TTCTCCACATCCTCGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAG
CTATTCTGACTGGTATGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATT
TCCCTGATGATTAAGGATGTTGAACATTTTTTAGGTACTTTTCAGCGATT
CGGTATTCCTCAGTTGAGAATTCTTTTGTTAGCTCTGTACCCTATTTTTT
ATTAGGGTTATTTGGTTTTCTGGAATGAGGTTTGTGTCTANAAAAAGACC
CCCGTCCAGAAATCCTCCTTTATGGTTTCACAAAAACCGTGTGGGTGGTA
TTAAGGTATATTTTTTCTCACTTTTTTTTTACCCTTGTTTCCCGTTTTCC
CGCTTCACACTTTTATTGTTCTTTTCTCCCTCCCTG

TTGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXAATGTCAAAAGAGGTGGCTTGATGAGCTTCGAA
GGGAGATGCAACCATTGATTATGATACTTGAACAACACAGCCCTGTTGGG
TCTGAAATTGCACTTCAAGTCTGAATTTATAGAACTCGTGCAGACACTGG
CCAAGAGGGTGACACATTAGCAGGAGCTTTCTGAATAAGCATGATTGAGA
TGAGTGCCTGCAGAGGTAAAAACAGTTTGCTGTAGCTTTTAGTAACTAGG
TGTGTGAATGAAGGCTGTTTCAATTGCAAAGGCATGACTGGTGACAACGA
GGACTCGAGACCATCTCTCTAAGGAGTTCGGTGACAGCACTCTCTTGTTC
ATAAACCATGAATTCCCCTCCACCCCCCCCCCCCGCCCAGGCTTTCATAT
AGAAATAAGGCTCGAGTTCTTTGAAGGAGGCCATGATGGGCTCCTTCTCT
GACCACATGTGATGCTCCAATGACACCAACAGCTCTCTCCATTTTCATAC
TCATCCTCTGGGTTGTTTTTCCATTCTCAGCCCTTTCGGACAAAATTAAT
GGTTGATTTCCTGCCCCGTGTAAAAAAGGGAATTTCTGGCATTACAAGCT
GGCCCCTAATTTCTCCTTAAGCCCAAGTATGATCCTGAATTTTTTATTTC
CTCGTCGCTCCCCCTCAAATGCGTGGGAAAAAATTTTATCGTCCC

Query= MSMg01no385_g19.g1 MSMg01no385_g19.g1 CHROMAT_FILE:
MSMg01no385_g19.g1 PHD_FILE: MSMg01no385_g19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:27:59 2005
         (446 letters)



>mm_chr1_189506742_189507587
          Length = 846

 Score =  731 bits (378), Expect = 0.0
 Identities = 428/448 (95%), Gaps = 10/448 (2%)
 Strand = Plus / Minus

                                                                       
Query: 1   aatgtcaaaagaggtggcttgatgagcttcgaagggagatgcaaccattgattatgatac 60
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 557 aatgtcaaaagaggtggcttgatgagcttcgaagggagatgcaaccatcgattatgatac 498

                                                                       
Query: 61  ttgaacaacacagccctgttgggtctgaaattgcacttcaagtctgaatttatagaactc 120
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 497 ttgaacaacacagccctgttgggtccgaaattgcacttcaagtctgaatttatagaactc 438

                                                                       
Query: 121 gtgcagacact-ggccaagagggt-gacacattagcaggagctttctgaataagcatgat 178
           ||||||||||| || ||||||||| | ||||||||||||||||||| |||||||||||||
Sbjct: 437 gtgcagacactgggtcaagagggtag-cacattagcaggagctttccgaataagcatgat 379

                                                                       
Query: 179 tgagatgagtgcctgcagaggtaaaaacagtttgctgtagcttttagtaactaggtgtgt 238
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 tgagatgagtgcctgcagaggtaaaaacagtttgctgtagcttttagtaactaggtgtgt 319

                                                                       
Query: 239 gaatgaaggctgtttcaattgcaaaggcatgactggtgacaacgaggactcgagaccatc 298
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 318 gaatgaaggctgtttcaattgcaaaggcatgactggtgacaacgaggactcgggaccatc 259

                                                                       
Query: 299 tctctaaggagttcggtgacagcactctcttgttcataaaccatgaattcccctccaccc 358
           | ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| 
Sbjct: 258 tttctaaggagttcggtgatagcactctcttgttcataaaccatgaat-cccctccacct 200

                                                                       
Query: 359 cccccccccgcccaggctttcatatagaaataaggctcgagttctttgaaggaggccatg 418
           |||      |||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 199 ccc------gcccaggctttcatatagaaataaagctcgagttctttgaaggaggccatg 146

                                       
Query: 419 atgggctccttctctgaccacatgtgat 446
           |||| |||||||||||||||||||||||
Sbjct: 145 atggtctccttctctgaccacatgtgat 118


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 446
Length of database: 846
Length adjustment: 10
Effective length of query: 436
Effective length of database: 836
Effective search space:   364496
Effective search space used:   364496
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)