TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTCTGGTGTAACTTTTAGGGTCACTTATATATACTATCATATCATCT
GCAAAAAGTGATATTTTGACTTGTTCCTTTCCAATTTGTATCCCCTTGAT
CTCCTTTTGTTGTCTAATTGCTCTGGCTAAGACTTCAAGTACAATGTTGA
ATAGGTAGGGCAAGAGTGGACAGCCTTGTCTAGTCCCTGATTTTAGTGGG
ATTGCTCCCAGCTTCTCACCATTTACTTTGATGTTGGCTATTGGTTTGCT
GTAGATTGTTTTTATCATGTTTAGGTATCGGCCTTGAATTCCTGATCTTT
CCAAGACTTTTATCATGAATGGGTGTTGGATTTTGTCAAATGCTTTCTCA
GCATCTAATGAGATGATCATGTGGTTTTTGTCTTTGAGTTTGTTTATATA
ATGGATTACATTGATGGATTTTCGTATATTAAACCATCCCTGCATCCCTG
GAATAAAACATACTTGGTCAGGGTGGATGATTGTTTTGATGTGTTCTTGG
ATTCGGTTAGCAAGAATTTTATTGAGGATTTTTGCATTGATATTCATAAG
GGAAATTGGTCTGAAGTTCTCTATCTTTGTTGGGTCTTTTTGTGGTTTAG
GTATCAGAGTAATTGTGGTTTCATAGAATGAGTTGAGTAGAGTACCTTCC
GTTTCTATTTTGTGGAATAGTTTGTGAAGAACTGGAATTAGATCT

ATGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXACATCTCAAAATTGCAAGTGGATGGCCATTTGA
GGAACAACACTTGATGGTTGTCCTCTTTAATGCACATACACATATGCATC
TGAATACCTACAAGCACATACACATGTACACATACACACACACACACACA
CACACACACACACACACACACACACACACACACACTCTCACAGAGGAATA
TATACCTGCTCCTTTTTAAAGTACGTTCTTCTAACTGAAGCCCAGTCATG
TGACCTAGGTGCTCACTGATATTTTGGATTGACTGCTCCTTAGTTATCCT
TGAAGAGGTTATTTTTTTTCATCTCCCAATAAATATAATTTTGTATCGTT
ATTGTAATTAGATAAAATGGTCTCATACTTACTTGGAATTTGTTTTGAAA
GTAAACAACAGAATGAGTATGAGTATGAATATGTAATGACTGCAGCTTCT
TGCACTGTCCATTACCTTTCCTTGGTGATGACTCTGCATTTTCTCTCTAC
CTCCTAGTCAGATATCTGTAATGACACTGATGACTTTTTTACAGAGTAGT
TTCCATGAGTTCAATGTATTTTTTTTCTAAACCAAAATCACTATTTTTCA
AATGTCATGTTTTCTTCAGAACTACAAATTTTGCATAAAAATAGCATTTA
TAATTATTGTTTTCCTGTGATACAGGTATTGTTTTAACTTTAGTTTGT

Query= MSMg01no386_a13.g1 MSMg01no386_a13.g1 CHROMAT_FILE:
MSMg01no386_a13.g1 PHD_FILE: MSMg01no386_a13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:28:46 2005
         (651 letters)



>mm_chr1_105965130_105966184
          Length = 1055

 Score =  903 bits (467), Expect = 0.0
 Identities = 508/529 (96%), Gaps = 14/529 (2%)
 Strand = Plus / Minus

                                                                       
Query: 1   acatctcaaaattgcaagtggatggccatttgaggaacaacacttgatggttgtcctctt 60
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 888 acatctcaaaattgcaagtggatgtccatttgaggaacaacacttgatggttgtcctctt 829

                                                                       
Query: 61  taatgcacatacacatatgcatctgaatacctacaagcacatacacatgtacacatacac 120
           ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||
Sbjct: 828 taatgcacatacacatatgcatctgaatacctacaaggacatacacatatacacatacac 769

                                                                       
Query: 121 acacacacacacacacacacacacacacacacacacacacacacacactctcacagagga 180
           |||||||||||||||||||||||||||||||||||||||          |||||||||||
Sbjct: 768 acacacacacacacacacacacacacacacacacacaca----------ctcacagagga 719

                                                                       
Query: 181 atatatacctgctcctttttaaagtacgttcttctaactgaagcccagtcatgtgaccta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 atatatacctgctcctttttaaagtacgttcttctaactgaagcccagtcatgtgaccta 659

                                                                       
Query: 241 ggtgctcactgatattttggattgactgctccttagttatccttgaagaggtta--tttt 298
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||  ||||
Sbjct: 658 ggtgctcactgatatttttgattgactgctccttagttatccttgaagaggttatttttt 599

                                                                       
Query: 299 ttttcatctcccaataaatataattttgtatcgttattgtaattagataaaatggtctca 358
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 598 ttttcatctcccaataaatataattttgtatcgttattgtaattagatcaaatggtctca 539

                                                                       
Query: 359 tacttacttggaatttgttttgaaagtaaacaacagaatg--agtatgagtatgaatatg 416
           ||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||
Sbjct: 538 tacttacttggaatttgttttgaaagtaaacaacagaatgataatatgagtatgaatatg 479

                                                                       
Query: 417 taatgactgcagcttcttgcactgtccattacctttccttggtgatgactctgcattttc 476
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 taatgactgcagcttcttgcactgtccattacctttccttggtgatgactctgcattttc 419

                                                            
Query: 477 tctctacctcctagtcagatatctgtaatgacactgatgacttttttac 525
           |||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 418 tctctacctcctagtcagatatctgtaatgacactggtgacttttttac 370


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 65
Number of extensions: 23
Number of successful extensions: 23
Number of sequences better than 10.0: 1
Number of HSP's gapped: 14
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1055
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1045
Effective search space:   669845
Effective search space used:   669845
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)