Query= MSMg01no386_g10.b1 MSMg01no386_g10.b1 CHROMAT_FILE:
MSMg01no386_g10.b1 PHD_FILE: MSMg01no386_g10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:29:12 2005
(620 letters)
>mm_chr1_24321563_24322582
Length = 1020
Score = 586 bits (303), Expect = e-171
Identities = 321/327 (98%)
Strand = Plus / Minus
Query: 294 tggaccacatggttgggcctaagtgagtgagcctagtcctgctggaactagatgccccag 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1020 tggaccacatggttgggcctaagtgagtgagcctagtcctgctggaactagatgccccag 961
Query: 354 ggtggggtggtatccaaggggagttttcccttctctgaggagaatgggagttagtaatgg 413
|||||||||||| |||||||||| |||||||||||||||||||||||||| | |||||||
Sbjct: 960 ggtggggtggtacccaaggggagctttcccttctctgaggagaatgggaggtggtaatgg 901
Query: 414 gaggggtgatttgcaagggtagaactgggaagaaaggagaagggaaagaaggctgcaatt 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 900 gaggggtgatttgcaagggtagaactgggaagaaaggagaagggaaagaaggctgcaatt 841
Query: 474 gtgatgcaatgtgaaaaatatgaaacaaaaagtaaaaacataacttctatgttcatactg 533
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 840 gtgatgcaatgtgaaaaatatgaaacaaaaagtaaagacataacttctatgttcatactg 781
Query: 534 cattgtgttaatgtatatgcaaatatccatgggtttgggtttttttctctcttcttaact 593
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 cattgtgttcatgtatatgcaaatatccatgggtttgggtttttttctctcttcttaact 721
Query: 594 acagatcgcacttcctctcttgggaga 620
|||||||||||||||||||||||||||
Sbjct: 720 acagatcgcacttcctctcttgggaga 694
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 620
Length of database: 1020
Length adjustment: 10
Effective length of query: 610
Effective length of database: 1010
Effective search space: 616100
Effective search space used: 616100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no386_g10.g1 MSMg01no386_g10.g1 CHROMAT_FILE:
MSMg01no386_g10.g1 PHD_FILE: MSMg01no386_g10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:29:12 2005
(640 letters)
>mm_chr1_24151090_24152130
Length = 1041
Score = 1133 bits (586), Expect = 0.0
Identities = 629/654 (96%), Gaps = 19/654 (2%)
Strand = Plus / Plus
Query: 1 aaaacaaaccagtgtttataatgtaacgaggaaggtacatcttacatttaaaaatgatat 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 193 aaaacaaaccagtgtttataatgtaacaaggaaggtacatcttacatttaaaaatgatat 252
Query: 61 tccaattatcaagaaactggttttccatagtaagggccttccctcttttccctcccctcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 tccaattatcaagaaactggttttccatagtaagggccttccctcttttccctcccctcc 312
Query: 121 cctccccatctcttccccatcctgttttttgtttgtttgtttgttt-------------t 167
|| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 313 cc-----atctcttccccatcctgttttttgtttgtttgtttgtttgtttgttttgtttt 367
Query: 168 gttttgttttgtttttttggaggggaaatgtagattgtgttcatgcagtttttctgacta 227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 gttttgttttgtttttttggaggggaaatgtagattgtgttcatgcagtttttctgacta 427
Query: 228 attttttcacatgctttcttctttacaatatgcatgtctatccgtttggccatcttcttt 287
|||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 428 attttttcacatgctttcctcattacaatatgcatgtctatccgtttggccatcttcttt 487
Query: 288 cttactgcatcttctctaccttcataataccttcactaccttctctaccttaactgtatg 347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 cttactgcatcttctctaccttcataataccttcactaccttctctaccttaactgtatg 547
Query: 348 tgttgctacttctcagaacatggtatttgatctctgccctagaacatcattctgtcttac 407
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 548 tgttgctacttctcagaacatggtatttgatctctgccctagaacgtcattctgtcttac 607
Query: 408 gtagagctggcctcttctcttcttgctgcggctgtgtgg-aacactgcaggagtggacta 466
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 608 atagagctggcctcttctcttcttgctgcggctgtgtgggaacactgcaggagtggacta 667
Query: 467 gtcttacgtaaactcaatggccacttgatcttatgtgttatcatctctagtgggtggtgt 526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 gtcttacgtaaactcaatggccacttgatcttatgtgttatcatctctagtgggtggtgt 727
Query: 527 tctcatagtgatacattttaatttttatggtaaaaatttaaattgacatgcgtgcttgtg 586
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 728 tctcatagtgatacattttaatttttatggtaaaaatttaaattgacatgcatgcttgtg 787
Query: 587 tgcctgcatgtctctctgcacaccacatgcatgcagtgctcagggatccctgaa 640
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 tgcctgcatgtctctctgcacaccacatgcatgcagtgctcagggatccctgaa 841
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 640
Length of database: 1041
Length adjustment: 10
Effective length of query: 630
Effective length of database: 1031
Effective search space: 649530
Effective search space used: 649530
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
