TCATXXXXXXXXXXXXXXXXXXXXXXXXCTAAATGCGTACCTCCGCGGAA
TTCACTCTGTTACCAAAATAACCTCGAACTCAGAAATCTGCCTGCCTCTG
CCTCCCAAGTACTGGGATTAAAGGCGTGCGCCACCCCTGCCTGGTGGTGA
CAGATATTTTAATGGAAGCATTTAATATTTAATTTAATTATTAATTAATT
ATTAATATTTAATAATTATGGCAGAAGCTGGGAAGGACTACCTCCAGCTG
TTGTGGTCAGGTAGAGCAGTGTTTTGCTTTCCAGTGGGAGCGGCTGAGGG
GTATTCAGCCCAGGTTCCTTGGTTATGACTGGACTGATGCTCAGCCTTGA
CTGCCCTTTACGGAAGTCACACAGCTGGCTCGGTCCTAATACGGTCTTAT
TTATCTGAATTAGGCAACTAATTTGGTAGGTTTTAAAAGTGATGGAGATG
ACACTAAACCAGCCAAGCTGGCAAATAGCTGGGACCCAGGAGAGGCATTC
TTCTGGAGAACGTGGACACTAAAGAGCAGGTGATAATGGAAGCTGTTGAT
GCAGGTCAGGGTGGGGACAAGCGCAGGGAAAAGACGAGGCAGGAGACCTC
CGGGCAAACCAGCCCTGTGACGGAAGCAGAGGAAGTAATTCCCTTAGTAA
CTGTGTCCTGTGTTAATTCAGGTCATTAGTGTAGATGTTGGTTAGATCTT
ATGATTTAGTGTGGGCTAGATATGGATGTACCTTAAAT

ACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXCAGGACAGCCAGGGCTATACAGAGAAACCC
TGTCTCGAAACAAAACAAACAAAACAAAACAAAAACAAAAAAGAGAAATG
CTTAAAAAATGATTTACAACGTTCCTCTGAGAATTCTATAAAATCCACAG
AAAGTTCTCAAAAAATATTAATCAAATAGTAGGTTCTTCTTGGCTATGAG
TTTGCTTAACTAGTCATTACTTCCTTCAAGCATGACTCAGAGGGTCAAGT
TTATAGCCCAAAGGTGACAAAACTACAGGTGACAAAACTCTAAGCTGTGT
ACAGCCACACTTAGGCAACAGGGCGTCTTGAAGGAAGGCAATGTAACGTG
TGCTGTGTGGTCTAGATAGGAAGGAACAGTTCCCTACAGTGATGGTCATA
GCTGTGAAGGGGAACCATACATGCTTAACATCTAACCCGCATGTATTTCT
TCACTACACAGCTAAACTGTATACTGTCACTGGCAGTCATTTAAATTCCC
CCTGCCCTTTTTCTTTTCTCTTATTATCAATAGTATAATTTAATTATATC
ATTTGTGTCTTCCCCTTCCTCCCTACAAACCCTCACATGCATACCACCAT
GCTCTCTGTCAAGTTCATAACCTCTTTTTCATTAATTGTTGTTAAATGCA
TATATGTATATAAATATATATTCCTAAATATGATGCTCATTC

Query= MSMg01no386_l14.g1 MSMg01no386_l14.g1 CHROMAT_FILE:
MSMg01no386_l14.g1 PHD_FILE: MSMg01no386_l14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:29:35 2005
         (672 letters)



>mm_chr1_181263589_181264660
          Length = 1072

 Score = 1230 bits (636), Expect = 0.0
 Identities = 663/672 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   caggacagccagggctatacagagaaaccctgtctcgaaacaaaacaaacaaaacaaaac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caggacagccagggctatacagagaaaccctgtctcgaaacaaaacaaacaaaacaaaac 260

                                                                       
Query: 61  aaaaacaaaaaagagaaatgcttaaaaaatgatttacaacgttcctctgagaattctata 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaaacaaaaaagagaaatgcttaaaaaatgatttacaacgttcctctgagaattctata 320

                                                                       
Query: 121 aaatccacagaaagttctcaaaaaatattaatcaaatagtaggttcttcttggctatgag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaatccacagaaagttctcaaaaaatattaatcaaatagtaggttcttcttggctatgag 380

                                                                       
Query: 181 tttgcttaactagtcattacttccttcaagcatgactcagagggtcaagtttatagccca 240
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 381 tttgcttaactagtcattacttccttcaagcgtgactcagagggtcaagtttatagccca 440

                                                                       
Query: 241 aaggtgacaaaactacaggtgacaaaactctaagctgtgtacagccacacttaggcaaca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaggtgacaaaactacaggtgacaaaactctaagctgtgtacagccacacttaggcaaca 500

                                                                       
Query: 301 gggcgtcttgaaggaaggcaatgtaacgtgtgctgtgtggtctagataggaaggaacagt 360
           |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||
Sbjct: 501 gggcgtcttgaaggaaggcaatctaacgtgtgctgtgtgttctagataggaaggaacagt 560

                                                                       
Query: 361 tccctacagtgatggtcatagctgtgaaggggaaccatacatgcttaacatctaacccgc 420
           || ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 561 tctctacagtgatgatcatagctgtgaaggggaaccatacatgcttaacatctaacctgc 620

                                                                       
Query: 421 atgtatttcttcactacacagctaaactgtatactgtcactggcagtcatttaaattccc 480
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atgcatttcttcactacacagctaaactgtatactgtcactggcagtcatttaaattccc 680

                                                                       
Query: 481 cctgccctttttcttttctcttattatcaatagtataatttaattatatcatttgtgtct 540
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 681 cctgccctttttcttttctcttattatcaatactataatttaattatatcatttgtgtct 740

                                                                       
Query: 541 tccccttcctccctacaaaccctcacatgcataccaccatgctctctgtcaagttcataa 600
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 741 tccccttcctccctacaaaccctcacatgcataccaccgtgctctctgtcaagttcataa 800

                                                                       
Query: 601 cctctttttcattaattgttgttaaatgcatatatgtatataaatatatattcctaaata 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 cctctttttcattaattgttgttaaatgcatatatgtatataaatatatattcctaaata 860

                       
Query: 661 tgatgctcattc 672
           ||||||||||||
Sbjct: 861 tgatgctcattc 872


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 672
Length of database: 1072
Length adjustment: 10
Effective length of query: 662
Effective length of database: 1062
Effective search space:   703044
Effective search space used:   703044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)