Query= MSMg01no387_o15.b1 MSMg01no387_o15.b1 CHROMAT_FILE:
MSMg01no387_o15.b1 PHD_FILE: MSMg01no387_o15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:31:06 2005
(343 letters)
>mm_chr1_35476883_35477624
Length = 742
Score = 636 bits (329), Expect = 0.0
Identities = 338/341 (99%), Gaps = 1/341 (0%)
Strand = Plus / Minus
Query: 3 gaattcttagcatttgtgttgtgggccatccatggagggctcaggttactttaggtgagc 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 gaattcttagcatttgtgttgtgggccatccatggagggctcaggttactttaggtgagc 483
Query: 63 tgttggcttttgtcacattagtcacttcccatctccacatggttaccatcatgctacctc 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 tgttggcttttgtcacattagtcacttcccatctccacatggttaccatcatgctacctc 423
Query: 123 cacatgactgacacctgttcatcaccccatcttcatatggctgacacctgttcatcaccc 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 cacatgactgacacctgttcatcaccccatcttcatatggctgacacctgttcatcaccc 363
Query: 183 catctccacatggctaccacgtgttcatcactctacctccacatgccatggttccaggta 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 catctccacatggctaccacgtgttcatcactctacctccacatgccatggttccaggta 303
Query: 243 catttctattctacaatccaagacatccacgatataaattgagaggagaaaaagtctctt 302
||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||
Sbjct: 302 catttctattctacaatccaagacatccaggatataaattgagaggagaaaa-gtctctt 244
Query: 303 ctcttttgttggaaagtgacagtttccacagaagtctcagt 343
||||||||||||||||| |||||||||||||||||||||||
Sbjct: 243 ctcttttgttggaaagtaacagtttccacagaagtctcagt 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 742
Length adjustment: 9
Effective length of query: 334
Effective length of database: 733
Effective search space: 244822
Effective search space used: 244822
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no387_o15.g1 MSMg01no387_o15.g1 CHROMAT_FILE:
MSMg01no387_o15.g1 PHD_FILE: MSMg01no387_o15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:31:06 2005
(461 letters)
>mm_chr1_35371414_35372274
Length = 861
Score = 861 bits (445), Expect = 0.0
Identities = 457/461 (99%)
Strand = Plus / Plus
Query: 1 cctgcttgctgcttactataaagccttgccccatagacatttggggctcgaacaccacca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctgcttgctgcttactataaagccttgccccatagacatttggggctcgaacaccacca 260
Query: 61 aaatcatcttgcatgatggaggtgtgttgggggccggaagaggtgagcttgctcaaatag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaatcatcttgcatgatggaggtgtgttgggggccggaagaggtgagcttgctcaaatag 320
Query: 121 aataaagatcctgctgtgagttgcatcatatctgttcctgtgtgtgttttggggcaatca 180
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aataaagaccctgctgtgagttgcatcatatctgttcctgtgtgtgttttggggcaatca 380
Query: 181 ctaacaattccctggcataacaagagtatgctgtaagaggagcatgaaaggtagagttag 240
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 381 ctaacaattccctggcataacaagagtatgctgtaagaggagcatggaaggtagagttag 440
Query: 241 ccagtgacaagcccacagctaaacttgtttggtctattggttctcatgtctgcagcaaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 441 ccagtgacaagcccacagctaaacttgtttggtctattggttctcatgtctgcagaaaaa 500
Query: 301 cttaatgggcacaccagaaaacgcaagcccatcagacataagcaaatgattacagagatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cttaatgggcacaccagaaaacgcaagcccatcagacataagcaaatgattacagagatg 560
Query: 361 aaacatgcatgcattcagaggagaccagacaaatgcaggcatttgatggccaacttcctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaacatgcatgcattcagaggagaccagacaaatgcaggcatttgatggccaacttcctt 620
Query: 421 cacatatcaatgccaggaagacaccccctttctctcagaaa 461
|||||||||||||||||||||||||||||||||| ||||||
Sbjct: 621 cacatatcaatgccaggaagacaccccctttctcccagaaa 661
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 461
Length of database: 861
Length adjustment: 10
Effective length of query: 451
Effective length of database: 851
Effective search space: 383801
Effective search space used: 383801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
