XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCACT
TACTTGGAGGAACAAAATAGTCTTGGGAGGCAGAGAAAGGCAGGACCTTG
GTGGATGAGGGCAAGGCTAGTGGAATGGAGGGGGGGGGGGACGGGATCAG
ACATGGGGAGAGGCAGGAGAGAGTCCCAGAGGGCCAGGAGAATGAAGGTT
TTCCAGTGTCTCGTTCAGAATATTTTTCCCGGACCCCCCTTTTTTTCCCC
CTTTAAAACCCCCGGGGGGGTCTTTTAAGGGGAGGGGGGCCCCCCTCCCC
CTGGCGCAAAAATTCCCCCCCACCTACTCTCTTTCCCCGCCGAGGAACAG
CTAGTCCTTTCCTCTCCCCCCCCCTTCCCCCCCCCCCTCCTTCTCCCTCC
CCCCCCGACCCTTTCTCCCCCCCTCCCCTCCCCCCCCCCCCCTCCCTCCT
TTCCTCTCCTCTCTTTCCCCCCCTCCCCCCCCCTCCTCCCTCCCCTCCCC
CCCTACCCCTCCCCCTCTCTCCTGCCCTGTTCGTTTCTTTCTTCGTTTCT
CCGCCTGTCCTCCCGTCCTTGTCCTCCCCGTCTTCCTCCTCTTCTCTCTT
CCCTCCTTCCCCTCCGCCTCCCCCCTCCCCCCCTCCCCTCCTCTTTTCCC
CTTCCTCCCCCTTCCCCCTCTCTTTCCCTCCCTCTCCCCTTCCCCCCCTC
TACCTCCATCTTCCCTCTCCTTCTTTCTTCCCTCCCTCCG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXATATCATTTCAATAGTTTAAGGGACATTTTTAGG
ATCTTTTAATTTATAATTATAGTTTGTACACTCAGGACTTTCTGTGATTG
TGTGAGTTGTGCCTATAAACACATGTGAAGACATATCAGATTAATATGTC
ACTGTTTATTCTACTTTAGGTTAGAAATAATAAAACAGCCCCATAACTAC
TTTTATCCAGCACTGATTTTATAGGATGGTTAGTAAAGTAAGTCAGGAAA
AGAAAAATATTTGTAAAAGAATAAAAAGTAGAAAAGAAAAGAACACTGTG
TATAGCTAATATTAGTCTATGGACAAGAATCAAACAAGTCCCGAGTTAAC
ACATTAGAGCTTGTTGAGAATATTTATCATCACTCCTGGTTTAAATCATG
TCATTGATTAATTGCACTCTACATTTCAGAAAACACAATTAGTAATTATG
TGTGGCATGCTTGTCATTATTTTTAAACAATGCTGGCAAATTCCTGGAAA
ATACCATTAGAGAGGGTAGGGCTTATTTTGACTCCTGATTCCACAGGGCT
CAGTCTATGGTCACTTGGCTCCTTTGCTAAAACGTCCAAAATGGGCATGT
GCTTTTACTGTCTAGATTTCATTTTGAGCTCTTTACCCTAAAGAAAGGAT
CTGAGGTCTGAACTCTGACATAAGAAGAGATAGCTCTGGTGAAGG

Query= MSMg01no388_b14.g1 MSMg01no388_b14.g1 CHROMAT_FILE:
MSMg01no388_b14.g1 PHD_FILE: MSMg01no388_b14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:31:21 2005
         (628 letters)



>mm_chr1_22984220_22985246
          Length = 1027

 Score = 1079 bits (558), Expect = 0.0
 Identities = 588/604 (97%), Gaps = 12/604 (1%)
 Strand = Plus / Minus

                                                                       
Query: 4   tcatttcaatagtttaagggacatttttaggatcttttaatttataattatagtttgtac 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 tcatttcaatagtttaagggacatttttaggatcttttaatttataattatagtttgtac 533

                                                                       
Query: 64  actcaggactttctgtgattgtgtgagttgtgcctataaacacatgtgaagacatatcag 123
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 actcaggacttcctgtgattgtgtgagttgtgcctataaacacatgtgaagacatatcag 473

                                                                       
Query: 124 attaatatgtcactgtttattctactttaggttagaaataataaaacagccccataacta 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 attaatatgtcactgtttattctactttaggttagaaataataaaacagccccataacta 413

                                                                       
Query: 184 cttttatccagcactgattttataggatggttagtaaagtaagtcaggaaaagaaaaata 243
           ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 412 cttttattcagcactgattttataggatggttagtaaagtaagtcaggaaaagaaaaa-a 354

                                                                       
Query: 244 tttgtaaaagaataaaaagtagaaaagaaaagaacactgtgtatagctaatattagtcta 303
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 aatgtaaaagaataaaaagtagaaaagaaaagaacactgtgtatagctaatattagtcta 294

                                                                       
Query: 304 tggacaagaatcaaacaagtcccgagttaacacattagagcttgttgagaatatttatca 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 tggacaagaatcaaacaagtcccgagttaacacattagagcttgttgagaatatttatca 234

                                                                       
Query: 364 tcactcctggtttaaatcatgtcattgattaattgcactctacatttcagaaaacacaat 423
           |||||||||||||||||||||||||||||   ||        ||||||||||||||||||
Sbjct: 233 tcactcctggtttaaatcatgtcattgat---tt--------catttcagaaaacacaat 185

                                                                       
Query: 424 tagtaattatgtgtggcatgcttgtcattatttttaaacaatgctggcaaattcctggaa 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 tagtaattatgtgtggcatgcttgtcattatttttaaacaatgctggcaaattcctggaa 125

                                                                       
Query: 484 aataccattagagagggtagggcttattttgactcctgattccacagggctcagtctatg 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 aataccattagagagggtagggcttattttgactcctgattccacagggctcagtctatg 65

                                                                       
Query: 544 gtcacttggctcctttgctaaaacgtccaaaatgggcatgtgcttttactgtctagattt 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64  gtcacttggctcctttgctaaaacgtccaaaatgggcatgtgcttttactgtctagattt 5

               
Query: 604 catt 607
           ||||
Sbjct: 4   catt 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1027
Length adjustment: 10
Effective length of query: 618
Effective length of database: 1017
Effective search space:   628506
Effective search space used:   628506
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)