XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
CATAAGCATAAAAAGAGAGACAACCTCCACCCTCTCTATTAAGAATCCCA
TGAGAACACCAAGCTACTCAATCATAACGTAAACACAGGACCTGGATCAG
ACCTCTGTAGTCTTTTTAATCTCTTCAAGTTCCCATGAGTCCCTATCAGT
TTATTCTATGGGCCATGGTCTTGTGGTGTCATCTATCTCATAGCTTACTT
TAGTACCTCTAGTATCTCAGAATCTTACCCCCTCCTCTGCACAGGACTCC
ATTAATTGTGCCTAGCATTTGGCTGTGTGACTTATCATCTGCTCTCATCT
TTTGTTGGATGAAATCTCCATGATCACTTTGATGACAATTCTGCTATTCT
CCAGTTCCAGAACTCTTTTCAAGCAGAATAAACTGTACATCAGAGGATAT
GTGCCTGACTTGGTGTCTCAATTCCTACCCTTGAGTCCTTGCCTGGTTAC
AGAAGATAGCCAGTTCTGCAATTACTAGGAGTTTTTGCTCAGACTTCTCT
CATAGATTCCATGGAATATACATTGCATTAAGGTTCCATATTGCTTCCCC
AAGAGCCCTATTTCCAATCTTTCTCCCAAAATTTTCTCTACTGCAACCCA
CTGGATCTCTTCTGGTTCCAAGGACTTTACTTTCTTCCAACAGGAAAGGC
CATTCTATTTCTTGTTCCCCAAGAAGACCCCTTAACTCCCCCCAATTAAG
AAAACTTTTTTGAAACCGGGGACCTGCGACATGAA

GTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXCAGGAGGTCTTTAATTTATTTATTTATTTCCTG
AACAAGTTATCATCAAGTAAAAAGTTGTTCTGTTTTCATGGGTATGTGCG
GTTTCTGTTCTTTTTGTTGTTATCAAAGTCTAGGCTTAGTCCATGGTGAT
CAGATAGGATGCATGGAGTTATTTCAATCTTCCTGTATCTGGTAAGACTT
GTTTTATAACTAATTATATGGTTGGTTTTAGAGAATGTAATATGAGGTAC
TGAAAGAATGCATATTCTTTCATTTATGATGAAATATTCTTTCTATATCT
ATTAAATCCATTTGGTCTATTACCTCTATCAGTTTATTTGTCAATAACCT
GCTCATTANAGTGAGTGGGGTGTTGAAATATCCCACTATCATTGTATGGT
ATTCAATGTGTGTTTTGAGCTTTAGTAAGTTTCTTTTATGAATGTGGGTG
CCCTTCCATTTTCGAGCATTGTTGAGAATTAAGAATTTCTCTTGGTGGAT
TTCTCCTTAGATGAATATTAAGTATCCTTCCCCATCTTTCTTGATAATTT
TTGGGTGGAAAGCCATTTTTTTGGATATTATAATAACCCCTAGAAGTTTT
TTTTTGTTAACAATTCCCTTGAAGAATTTTTTTTAGCCATTTCTTTTTAG
TACTGGCCGGCCCTCTTTTTGTGACCTGTTTTTTATCTTACCAATTATGG
T

Query= MSMg01no388_l22.b1 MSMg01no388_l22.b1 CHROMAT_FILE:
MSMg01no388_l22.b1 PHD_FILE: MSMg01no388_l22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:32:08 2005
         (463 letters)



>mm_chr1_118495305_118496167
          Length = 863

 Score =  857 bits (443), Expect = 0.0
 Identities = 455/459 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccataagcataaaaagagagacaacctccaccctctctattaagaatcccatgag 64
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccataagcagaaaaagagagacaacctccaccctctctattaagaatcccatgag 264

                                                                       
Query: 65  aacaccaagctactcaatcataacgtaaacacaggacctggatcagacctctgtagtctt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aacaccaagctactcaatcataacgtaaacacaggacctggatcagacctctgtagtctt 324

                                                                       
Query: 125 tttaatctcttcaagttcccatgagtccctatcagtttattctatgggccatggtcttgt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tttaatctcttcaagttcccatgagtccctatcagtttattctatgggccatggtcttgt 384

                                                                       
Query: 185 ggtgtcatctatctcatagcttactttagtacctctagtatctcagaatcttaccccctc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggtgtcatctatctcatagcttactttagtacctctagtatctcagaatcttaccccctc 444

                                                                       
Query: 245 ctctgcacaggactccattaattgtgcctagcatttggctgtgtgacttatcatctgctc 304
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 445 ctctgcacaggactccattaattgtgcctagcatttggctgtgtgacttatcgtctgctc 504

                                                                       
Query: 305 tcatcttttgttggatgaaatctccatgatcactttgatgacaattctgctattctccag 364
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tcgtcttttgttggatgaaatctccatgatcactttgatgacaattctgctattctccag 564

                                                                       
Query: 365 ttccagaactcttttcaagcagaataaactgtacatcagaggatatgtgcctgacttggt 424
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 565 ttccagaactcttttcaagcagaataaactgtacaccagaggatatgtgcctgacttggt 624

                                                  
Query: 425 gtctcaattcctacccttgagtccttgcctggttacaga 463
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gtctcaattcctacccttgagtccttgcctggttacaga 663


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 463
Length of database: 863
Length adjustment: 10
Effective length of query: 453
Effective length of database: 853
Effective search space:   386409
Effective search space used:   386409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)