NNNNNNTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCCAGAGCTGTATGTTCCCTTATTTTAGGTTCTCTTATTCTT
TGAAGTAGTCTATGAAAGTTCCTGTTTAGTATAGGAACAAGAAAGTACAG
ATGGAATAGTCTCTAAATCAGAAAAGTTAAAAATACTGTATCCTTATCAC
ATATCCTGAGGCAACTAATTTAATTTTCTTTTATGCCTTTCTGACTTCAG
TTTTATTAAATTTTCAGTCTGTCAACATCATGGAGAATTTTCTTAATTTT
CTGGATTGACTTTCTGATAGCATGCTTCATATTAAAGACAATATTTTAGC
TGTGGTTGAAATAATTTATAGGTTGTTATTAATTCATCAGTAGTATTTCA
GAAACCTTCTTAAAACTTTGCTCACTGCCCCTTGTTTGTTTGTTTCTTGG
TTGGGACAAGGTAAGTGCTGCGCAGGAAGCTGAAGTGTCACGGGGAGCCT
TTCTCCTCCCTGACGACTATGTANGAACCCGAGTGAAAGCGTTGCCAGCT
TACTCCACCAATTTGATAGAAATTTTCCTTAATCCACGACCCAGGACCAA
TTTTTAGAATCCTTCTCAACCTGCTAGGAAAAAGGGAGAACCTTTTCCCC
CCGGCAGCTACATGCTCCCGGAAACCGGGATTGGCCAGTGGCTTTGGGTG
TATACCGGGCCCCGAAAGGGCCTTGTCCAAAAGAAGAGAAAACCCTGCAC
CCGAGTGGGTCCCTCCTGCCAACCCGGGGGGCGGCGGGGGGN

NNNNNCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGTATACTTTTTAGACA
GAAGGATATTTGTAACAAGTAGACACTTGGGAATGGTGGGTATATTTCAC
ATTTACATATAGTTCCACTTAAAACCCATCATATGAAAAAGGACCTAACC
ATTTATTTTGACATCAATATACGTATTTCTACACTCTGCTGCAGTCTTTG
GACTAATTTTTAAACATTCTAGTTTCATCCAGCTTAAGACATTGAGATTC
ACAATGAACCTAGCAGGCCTCTTTGGAGAACATGTATAAGGGAACCTGCT
GCTCCAGAAGCGGTACCTGCATGCTGCCTTTCAGATCCACTGGAATCTGC
AACTGGGCATCTAGCTAGCACTCTTGGGAGGGGGGACGCAGTGCTGGGTT
TCTCTACCTACAACACTAGGCCACAAGATCAATGACAGCAATTTAAATCT
TTCCCGATCCATCCATCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC
TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCCTTCTTCCTTCCTT
CCTTCCTCCTGATTTANANCNNAAGGCTTTATGTACCTTTTCCCCAATAA
AATTGACAACCTTCCCCCCAAACAAATTGTTTTTAAAAAACCCGAAAAAA
AATCTCTCCCCCCATCCCTAAAAAATGGGGGGTAAAAAATGGCTCCGGGC
TCATT

Query= MSMg01no389_a23.b1 MSMg01no389_a23.b1 CHROMAT_FILE:
MSMg01no389_a23.b1 PHD_FILE: MSMg01no389_a23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:32:32 2005
         (379 letters)



>mm_chr1_61741043_61741821
          Length = 779

 Score =  733 bits (379), Expect = 0.0
 Identities = 379/379 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   gagctgtatgttcccttattttaggttctcttattctttgaagtagtctatgaaagttcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gagctgtatgttcccttattttaggttctcttattctttgaagtagtctatgaaagttcc 260

                                                                       
Query: 61  tgtttagtataggaacaagaaagtacagatggaatagtctctaaatcagaaaagttaaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtttagtataggaacaagaaagtacagatggaatagtctctaaatcagaaaagttaaaa 320

                                                                       
Query: 121 atactgtatccttatcacatatcctgaggcaactaatttaattttcttttatgcctttct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atactgtatccttatcacatatcctgaggcaactaatttaattttcttttatgcctttct 380

                                                                       
Query: 181 gacttcagttttattaaattttcagtctgtcaacatcatggagaattttcttaattttct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gacttcagttttattaaattttcagtctgtcaacatcatggagaattttcttaattttct 440

                                                                       
Query: 241 ggattgactttctgatagcatgcttcatattaaagacaatattttagctgtggttgaaat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggattgactttctgatagcatgcttcatattaaagacaatattttagctgtggttgaaat 500

                                                                       
Query: 301 aatttataggttgttattaattcatcagtagtatttcagaaaccttcttaaaactttgct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aatttataggttgttattaattcatcagtagtatttcagaaaccttcttaaaactttgct 560

                              
Query: 361 cactgccccttgtttgttt 379
           |||||||||||||||||||
Sbjct: 561 cactgccccttgtttgttt 579


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 379
Length of database: 779
Length adjustment: 9
Effective length of query: 370
Effective length of database: 770
Effective search space:   284900
Effective search space used:   284900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no389_a23.g1 MSMg01no389_a23.g1 CHROMAT_FILE:
MSMg01no389_a23.g1 PHD_FILE: MSMg01no389_a23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:32:32 2005
         (481 letters)



>mm_chr1_61873373_61874253
          Length = 881

 Score =  868 bits (449), Expect = 0.0
 Identities = 473/481 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   agtatactttttagacagaaggatatttgtaacaagtagacacttgggaatggtgggtat 60
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 621 agtatactttttagacagaaggatatttgtaacaagtagacacctgggaatggtgggtat 562

                                                                       
Query: 61  atttcacatttacatatagttccacttaaaacccatcatatgaaaaaggacctaaccatt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atttcacatttacatatagttccacttaaaacccatcatatgaaaaaggacctaaccatt 502

                                                                       
Query: 121 tattttgacatcaatatacgtatttctacactctgctgcagtctttggactaatttttaa 180
           ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tatttcgacatcaatatacatatttctacactctgctgcagtctttggactaatttttaa 442

                                                                       
Query: 181 acattctagtttcatccagcttaagacattgagattcacaatgaacctagcaggcctctt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acattctagtttcatccagcttaagacattgagattcacaatgaacctagcaggcctctt 382

                                                                       
Query: 241 tggagaacatgtataagggaacctgctgctccagaagcggtacctgcatgctgcctttca 300
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 381 tggagaacatgtataagggaacctgctgctccagaagcagtacctgcatgctgcctttca 322

                                                                       
Query: 301 gatccactggaatctgcaactgggcatctagctagcactcttgggaggggggacgcagtg 360
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 321 gatccactggaatctgcaactgggcatctagctagcactcttgggaggggggactcagtg 262

                                                                       
Query: 361 ctgggtttctctacctacaacactaggccacaagatcaatgacagcaatttaaatctttc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgggtttctctacctacaacactaggccacaagatcaatgacagcaatttaaatctttc 202

                                                                       
Query: 421 ccgatccatccatccttccttccttccttccttccttccttccttccttccttccttcct 480
           | ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgatccttccttccttccttccttccttccttccttccttccttccttccttccttcct 142

            
Query: 481 t 481
           |
Sbjct: 141 t 141


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 61
Number of extensions: 18
Number of successful extensions: 18
Number of sequences better than 10.0: 1
Number of HSP's gapped: 17
Number of HSP's successfully gapped: 1
Length of query: 481
Length of database: 881
Length adjustment: 10
Effective length of query: 471
Effective length of database: 871
Effective search space:   410241
Effective search space used:   410241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)