CCTCTCCCCTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXCGCGGAATTCTACCAGACTTTCAAGAAGACGTGATACCAATTTTC
TTCAAAATATGCCATAACATAGAAACAGAGAAACTCAACCAAATTTGATC
TATGAAGCCACAATTATTCTGATACCTAAACCACATAAGGACCCAATGAT
AAAAGATAATTCAGACCAATTTCACTTAGGAATATTGATGCAAAAATGCT
CAATAAAATTCTTACAAACCTAATCCAAGAAGACAATAAACCATCATTCA
TTGCGATCCAGTAGGCTGCATCCCAGGGATGCAAGGTTGGTTTAACATAA
GAAAGGCCATTAACATAATCCACTATACAAACAAACTCAAAGAAAAAAGA
TCACATGATCATCTCATTAGATTCAGAAAAAGCATTTAACAAAATACAAC
ACTCTTTCATGTTAAAAGTATTGGAGAGAGATCAGGAATTAAAGATGCAT
ACCTAAACACAATAAAAGCAATTTACTAAAAACCAACAGCCAATATCAAA
TTAAATGGACATATACTTGAAGCAATCTTACTGAAATCTCAGACAAGACA
AGGATTCCTACTGCCACATATCTACACAATATGGTATTTGAAATGTTAGC
TACAACCATAAGATAACAAAAAGAGATCAAGAGGAAACAAACTGGTAAAG
AAGAAATAAAGGTATCACTATTTGCAGATGATATGATAGTAA

NNNNGGCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACAGACAAGGGGACCAGAC
CAAGAAACAGACTTGAGGGTTGCAGAAGACGTAGTACCATTGTGTAAGAG
TCAAAGAAAAGCACCCCCAACCCCATCATTGGGTCTATGGCAGCAAAGAT
GAAATATACATTTTAGTAAGTAATAATCCAGGCATATAGGAAGGGGGGGG
TGTTAGCAACATGGACATTTGGGGATGGCCCAATCATTGTACTGTTTAAG
GAGTAATAAAATAGTAGTCTGCCCGTTTTTGTCTTTCATTTGAGAACCCA
GAGAATTGAGGCAGTAGTGAGAAATGCGTGCGACTGCCTGGGAGAATAGA
ACAATTTAATCAATTACAGCTCCAGAAGAAAGAGAAACTAATGTCTGCAG
ATTTTGTCTGACCTCTATATGTATTCTTAAGACAGAGAGACAGAAGGAAT
GAGTATAGTTACAGAAAGACGGAAATGATGTATTAATAACTCATGACACA
GGGCATGATTCAAACACATTTAGCTGAAACTGACCAGTTGAAAAAAATTC
ACAGGCTACATTTCAAAAAGACTATGCCCCAACTTCTGACAAACATAACC
CAGAATTTAGCTGATATGCCCTTACTATATAAGAACCCTGTCCAAAATTA
GGAAAATGTTTTCTAATTTTCCTTCACCTTTCCTAAATTTCATATAAA

Query= MSMg01no389_b02.g1 MSMg01no389_b02.g1 CHROMAT_FILE:
MSMg01no389_b02.g1 PHD_FILE: MSMg01no389_b02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:32:33 2005
         (531 letters)



>mm_chr1_101035501_101036431
          Length = 931

 Score =  940 bits (486), Expect = 0.0
 Identities = 520/532 (97%), Gaps = 3/532 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   acagacaaggggaccagaccaagaaacagacttgagggttgcagaagacgtagt-accat 59
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 202 acagacaaggggaccagaccaagaaacagacttgagggttgcagaagacgtagtaaccat 261

                                                                       
Query: 60  tgtgtaagagtcaaagaaaagcacccccaaccccatcattgggtctatggcagcaaagat 119
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 262 tgtgtaagagtcaaagaaaagcacccccaaccccatcattgggtctatggtagcaaagat 321

                                                                       
Query: 120 gaaatatacattttagtaagtaataatccaggcatataggaaggggggggtgttagcaac 179
           ||||||||||||||||||||||||||||||| ||||||||||  |||||||||||| |||
Sbjct: 322 gaaatatacattttagtaagtaataatccagtcatataggaa--ggggggtgttagtaac 379

                                                                       
Query: 180 atggacatttggggatggcccaatcattgtactgtttaaggagtaataaaatagtagtct 239
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 atggacatttgggaatggcccaatcattgtactgtttaaggagtaataaaatagtagtct 439

                                                                       
Query: 240 gcccgtttttgtctttcatttgagaacccagagaattgaggcagtagtgagaaatgcgtg 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gcccgtttttgtctttcatttgagaacccagagaattgaggcagtagtgagaaatgcgtg 499

                                                                       
Query: 300 cgactgcctgggagaatagaacaatttaatcaattacagctccagaagaaagagaaacta 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 cgactgcctgggagaatagaacaatttaatcaattacagctccagaagaaagagaaacta 559

                                                                       
Query: 360 atgtctgcagattttgtctgacctctatatgtattcttaagacagagagacagaaggaat 419
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 560 atgtctgcagattttgtctgacctctgtatgtattcttaagacagagagacagaaggaat 619

                                                                       
Query: 420 gagtatagttacagaaagacggaaatgatgtattaataactcatgacacagggcatgatt 479
           ||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 620 gagtatacttacagaaagacgaaaatgatgtattaataactcttgacacagggcatgatt 679

                                                               
Query: 480 caaacacatttagctgaaactgaccagttgaaaaaaattcacaggctacatt 531
           |||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 680 caaacacatttagctgaaactgaccagttgaaaaaatttcacaggctacatt 731


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 531
Length of database: 931
Length adjustment: 10
Effective length of query: 521
Effective length of database: 921
Effective search space:   479841
Effective search space used:   479841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)