Query= MSMg01no391_f20.b1 MSMg01no391_f20.b1 CHROMAT_FILE:
MSMg01no391_f20.b1 PHD_FILE: MSMg01no391_f20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:35:33 2005
(412 letters)
>mm_chr1_74350767_74351578
Length = 812
Score = 717 bits (371), Expect = 0.0
Identities = 400/410 (97%), Gaps = 2/410 (0%)
Strand = Plus / Plus
Query: 4 gaattccagact-caccccagtaagaagcgctatttatgcgtcatcagtgcctacatacc 62
|||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct: 204 gaattccagactccaccccagtaagaagtgctatttatgcgtcatcagtgcctacatatc 263
Query: 63 agcgatttgcgctaggggctttagagctagtcctgttgtcttaaaagttgttattgggtt 122
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 264 agcgatttgcgctaggggctttagagctaatcctgttgtcttaaaagttgttattgggtt 323
Query: 123 tgtttttttgtttgtttgtattctgggtaaaagagcgatgtcgctatgtacctcaggctg 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tgtttttttgtttgtttgtattctgggtaaaagagcgatgtcgctatgtacctcaggctg 383
Query: 183 gtctccagcacttgtcacccggcctcagcccaagtgttgcaattactgaccctggtttca 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gtctccagcacttgtcacccggcctcagcccaagtgttgcaattactgaccctggtttca 443
Query: 243 cattgtcagatttcactgatttttttttccctctttttcttttttgncactaactgatct 302
||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||
Sbjct: 444 catagtcagatttcactgatttttttt-ccctctttttcttttttgtcactaactgatct 502
Query: 303 tcagcactttcggtctaggggcgtaggtcagtggtggatctctggctttccatgtgagag 362
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 503 tcagcactttcggtctaggggcgtaggtcagtggtagatctctggctttccatgtgagag 562
Query: 363 acccagctggctttcatccccatgccaggaaaacccaacaacaaaagaat 412
|||||||||| |||||||||||||||||||||||| ||||||||||||||
Sbjct: 563 acccagctgggtttcatccccatgccaggaaaaccaaacaacaaaagaat 612
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 412
Length of database: 812
Length adjustment: 9
Effective length of query: 403
Effective length of database: 803
Effective search space: 323609
Effective search space used: 323609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no391_f20.g1 MSMg01no391_f20.g1 CHROMAT_FILE:
MSMg01no391_f20.g1 PHD_FILE: MSMg01no391_f20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:35:33 2005
(309 letters)
>mm_chr1_74542760_74543469
Length = 710
Score = 549 bits (284), Expect = e-161
Identities = 304/312 (97%), Gaps = 5/312 (1%)
Strand = Plus / Minus
Query: 1 ccaccccaaaactagagagagtgcatgcatgtctgtaatcccagcatactcttataggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 510 ccaccccaaaactagagagagtgcatgcatgtctgtaatcccagcatactcctataggaa 451
Query: 61 ataggaggctgagacaaaatcataggaagtttatgggttccttagcctgc-ggatacagc 119
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 450 ataggaggctgagacaaaatcataggaagtttatgggttccttagcctgcgggatacagc 391
Query: 120 agtgataaaaagagaccttgtctcagacaactgctgtacaggtatgcctctactcaagta 179
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
Sbjct: 390 agtgataaaaagagaccttgtcttagacaactgctgtacaggtatgcctctactcaagca 331
Query: 180 cacacatcatacacacaaaaaagagaagaaaataattcattctggaaacttgagtatttg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 cacacatcatacacacaaaaaagagaagaaaataattcattctggaaacttgagtatttg 271
Query: 240 tttaaagcct--aattgcttaatgggaatggtaatgctgaatattgggttagggaaggaa 297
||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 tttaaag--ttaaattgcttaatgggaatggtaatgctgaatattgggttagggaaggaa 213
Query: 298 taagattttttt 309
||||||||||||
Sbjct: 212 taagattttttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 309
Length of database: 710
Length adjustment: 9
Effective length of query: 300
Effective length of database: 701
Effective search space: 210300
Effective search space used: 210300
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
