Query= MSMg01no392_i19.b1 MSMg01no392_i19.b1 CHROMAT_FILE:
MSMg01no392_i19.b1 PHD_FILE: MSMg01no392_i19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:37:06 2005
(223 letters)
>mm_chr1_121336212_121336836
Length = 625
Score = 323 bits (167), Expect = 5e-93
Identities = 207/221 (93%), Gaps = 2/221 (0%)
Strand = Plus / Minus
Query: 1 aaataaaaagataaaaatataatcccccaaagaaacatgtggctcagtagggtacatact 60
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 535 aaataaaaagataaaaatataatcccagaaagaaacatgtggctcagtagggtacatact 476
Query: 61 gctgttgcagaggacacaggctcggttgccagtccccaggtcaggcagctcacacagctg 120
|||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 gctgttacagaggacacaagctcggttgccagtccccaggtcaggcagctcacacagctg 416
Query: 121 ggatctgacacctctgtactctgaaagcacctgctttcgggcgcacattactcca--cac 178
|| || |||||||||||||||||||||||||||| |||||||||||||||||| | |
Sbjct: 415 gggtccgacacctctgtactctgaaagcacctgcacacgggcgcacattactccaccccc 356
Query: 179 ccccataattacaaataaatttttgaaaagaacaaagatga 219
||||||||||||||||||||||||||||||| ||||||||
Sbjct: 355 ccccataattacaaataaatttttgaaaagattaaagatga 315
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 223
Length of database: 625
Length adjustment: 9
Effective length of query: 214
Effective length of database: 616
Effective search space: 131824
Effective search space used: 131824
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no392_i19.g1 MSMg01no392_i19.g1 CHROMAT_FILE:
MSMg01no392_i19.g1 PHD_FILE: MSMg01no392_i19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:37:06 2005
(169 letters)
>mm_chr1_121190307_121190875
Length = 569
Score = 311 bits (161), Expect = 1e-89
Identities = 167/169 (98%)
Strand = Plus / Plus
Query: 1 aggtgtccacaggtgaccttgctttgccaccactgtctatgtgacctcgggcactggcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggtgtccacaggtgaccttgctttgccaccactgtctatgtgacctcgggcactggcct 260
Query: 61 caaggctgaaagggggaaaaacagtaacagtgagcaagggtgttgtgcaattggagtgga 120
||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||
Sbjct: 261 caaggctgaaagggggaaaaacagtaacagtgagcgagggtgttgtgcaattggggtgga 320
Query: 121 aaggtaccacgcgggcgcttcaatagagggggaagtcaggactcaggct 169
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaggtaccacgcgggcgcttcaatagagggggaagtcaggactcaggct 369
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 169
Length of database: 569
Length adjustment: 8
Effective length of query: 161
Effective length of database: 561
Effective search space: 90321
Effective search space used: 90321
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
