Query= MSMg01no392_m08.b1 MSMg01no392_m08.b1 CHROMAT_FILE:
MSMg01no392_m08.b1 PHD_FILE: MSMg01no392_m08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:37:25 2005
(233 letters)
>mm_chr1_127658598_127659230
Length = 633
Score = 443 bits (229), Expect = e-129
Identities = 232/233 (99%)
Strand = Plus / Plus
Query: 1 tgctgggccactggcctcctgaatcatggcaatatggaccacatgtccctgccaggagcc 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgctgggccaccggcctcctgaatcatggcaatatggaccacatgtccctgccaggagcc 260
Query: 61 attagcatccttgatgaatgagattaggagcctgctggctctgtggagtcagaaaggtac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attagcatccttgatgaatgagattaggagcctgctggctctgtggagtcagaaaggtac 320
Query: 121 ccaggctcctagggtgtgcagcatcacaagacagagaaaacttgatttctgctgattttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccaggctcctagggtgtgcagcatcacaagacagagaaaacttgatttctgctgattttt 380
Query: 181 tgttttaaattgtatttgatttctaaatattagtttcatgctcatgcagccac 233
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgttttaaattgtatttgatttctaaatattagtttcatgctcatgcagccac 433
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 233
Length of database: 633
Length adjustment: 9
Effective length of query: 224
Effective length of database: 624
Effective search space: 139776
Effective search space used: 139776
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no392_m08.g1 MSMg01no392_m08.g1 CHROMAT_FILE:
MSMg01no392_m08.g1 PHD_FILE: MSMg01no392_m08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:37:25 2005
(114 letters)
>mm_chr1_127843881_127844391
Length = 511
Score = 157 bits (81), Expect = 2e-43
Identities = 105/115 (91%), Gaps = 5/115 (4%)
Strand = Plus / Minus
Query: 1 ctttccctctaa-aataaaaatcagatattttcattaattaccctttttgataatttcat 59
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 ctttccctctaacaataaaaatcagatattttcattaattaccctttttgataatttcat 252
Query: 60 acatgtatattcatccctccccatgtaaaaattttggaaaagatgacactaggtt 114
|||||||||||||||| ||| || |||||||||| |||||| |||||||||
Sbjct: 251 tcatgtatattcatccc----catctagaaattttggagaagatggcactaggtt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 2
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 114
Length of database: 511
Length adjustment: 8
Effective length of query: 106
Effective length of database: 503
Effective search space: 53318
Effective search space used: 53318
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
