Query= MSMg01no392_n13.b1 MSMg01no392_n13.b1 CHROMAT_FILE:
MSMg01no392_n13.b1 PHD_FILE: MSMg01no392_n13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:37:31 2005
(436 letters)
>mm_chr1_120489586_120490421
Length = 836
Score = 797 bits (412), Expect = 0.0
Identities = 427/432 (98%), Gaps = 1/432 (0%)
Strand = Plus / Minus
Query: 5 gaattcctgcttgtgtgtgtcacagtgaacctgaggaactcaagagggcaactttcaggc 64
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 767 gaattcctgcccgtgtgtgtcacagtgaacctgaggaactcaagagggcaactttcaggc 708
Query: 65 ctcattcctgtctcctaccttgtttgcaccagggtttctcctatactttgcggttgtgta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 ctcattcctgtctcctaccttgtttgcaccagggtttctcctatactttgcggttgtgta 648
Query: 125 agataacctcactggcttgtgagcttacagagattctcctgtctctgtctccagtcttgc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 agataacctcactggcttgtgagcttacagagattctcctgtctctgtctccagtcttgc 588
Query: 185 cataggggcactgggagcacacgcatgtgattaaccctgcttcactgaggtcctcatgca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 cataggggcactgggagcacacgcatgtgattaaccctgcttcactgaggtcctcatgca 528
Query: 245 gtgagggtccactgattctttggtcctctataaacttttaagatgtatttcagtttccaa 304
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 527 gtgagggtccactgattctttggtcctctagaaacttttaagatgtatttcagtttccaa 468
Query: 305 atgtcgggtttctagaagtcagagtcagtcagggaagatggctggtgttctggtgagatt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 atgtcgggtttctagaagtcagagtcagtcagggaagatggctggtgttctggtgagatt 408
Query: 365 ctgtctcaaaaataaaagaggaacaatacttgaagaatatccaagggtgacttcttgcct 424
||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 407 ctgtctcaaaa-taaaagaggaacaatacttgaagaacatccaagggtgacttcttgcct 349
Query: 425 ccacatgcacac 436
||||||||||||
Sbjct: 348 ccacatgcacac 337
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 436
Length of database: 836
Length adjustment: 9
Effective length of query: 427
Effective length of database: 827
Effective search space: 353129
Effective search space used: 353129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no392_n13.g1 MSMg01no392_n13.g1 CHROMAT_FILE:
MSMg01no392_n13.g1 PHD_FILE: MSMg01no392_n13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:37:31 2005
(249 letters)
>mm_chr1_120328725_120329373
Length = 649
Score = 462 bits (239), Expect = e-135
Identities = 245/247 (99%)
Strand = Plus / Plus
Query: 1 agaaacttggtctatctgtccatgcagggaaatgtctggtatggcatgtaccagcctcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agaaacttggtctatctgtccatgcagggaaatgtctggtatggcatgtaccagcctcct 260
Query: 61 agtggagtcaggacagtgcagtggttcatgcattgttgaagggtttgggtggagccttac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agtggagtcaggacagtgcagtggttcatgcattgttgaagggtttgggtggagccttac 320
Query: 121 tacatagtccaggatggtcttctacctcctctgcattctaatttcaggcacttgacatgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tacatagtccaggatggtcttctacctcctctgcattctaatttcaggcacttgacatgt 380
Query: 181 atgtaatatatatttggccttttggaatttaaaagtgttttagagcttttatttaaaagc 240
||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgcaacatatatttggccttttggaatttaaaagtgttttagagcttttatttaaaagc 440
Query: 241 tttagcc 247
|||||||
Sbjct: 441 tttagcc 447
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
