Query= MSMg01no393_o24.b1 MSMg01no393_o24.b1 CHROMAT_FILE:
MSMg01no393_o24.b1 PHD_FILE: MSMg01no393_o24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:39:07 2005
(350 letters)
>mm_chr1_131119203_131119952
Length = 750
Score = 601 bits (311), Expect = e-176
Identities = 325/331 (98%), Gaps = 4/331 (1%)
Strand = Plus / Minus
Query: 5 gaattcttggcacctcc--cctccctcccccatctaaaaaaccagcaagtggaatcactt 62
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 gaattcttggcac--ccaacctccctcccccatctaaaaaaccagcaagtggaatcactt 431
Query: 63 cccaacttttccccagtgatgacattaactggagaaggttctacacatttgaatatcctg 122
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 430 cccaacttttccccagtgatgacattaactggagaaggttctacacatctgaatatcctg 371
Query: 123 tgattaaagtgagaccatctggataagctcaagtaaccctattccaaggtttatactcta 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 tgattaaagtgagaccatctggataagctcaagtaaccctattccaaggtttatactcta 311
Query: 183 aatccctttaacagtggaagccagtatcttgaaggttcaatggattggggtaagaggaca 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 aatccctttaacagtggaagccagtatcttgaaggttcaatggattggggtaagaggaca 251
Query: 243 tcctgtggctatgggtaacagagagcttttgtttattcttactaccaagagagagagaga 302
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 250 tcctgtggctatgggtaacagagagcttttgtttattcttactaccgagagagagagaga 191
Query: 303 gagagagagagagagagagagagagagagag 333
|||||||||||||||||||||||||||||||
Sbjct: 190 gagagagagagagagagagagagagagagag 160
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 66
Number of extensions: 26
Number of successful extensions: 26
Number of sequences better than 10.0: 1
Number of HSP's gapped: 24
Number of HSP's successfully gapped: 1
Length of query: 350
Length of database: 750
Length adjustment: 9
Effective length of query: 341
Effective length of database: 741
Effective search space: 252681
Effective search space used: 252681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no393_o24.g1 MSMg01no393_o24.g1 CHROMAT_FILE:
MSMg01no393_o24.g1 PHD_FILE: MSMg01no393_o24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:39:07 2005
(338 letters)
>mm_chr1_130952754_130953491
Length = 738
Score = 630 bits (326), Expect = 0.0
Identities = 335/338 (99%)
Strand = Plus / Plus
Query: 1 cctttctttctctggttgatctcaggccccagtagtctgtaccatctaaacatctgactc 60
|||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||
Sbjct: 201 cctttctttctctggttgatctcaggccccagtagtgtgtaccatcttaacatctgactc 260
Query: 61 tgggacttggagcctgcagattccactattctcagggagcactgtggtaggtaggtgcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgggacttggagcctgcagattccactattctcagggagcactgtggtaggtaggtgcca 320
Query: 121 tgtgctgacccataagctccctgtctccaccttctacctgtctccatggtgacaaaaagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtgctgacccataagctccctgtctccaccttctacctgtctccatggtgacaaaaagg 380
Query: 181 gctctatctgagggtgcttctttggagcctaccattcattttgaaaacatggtgctgatt 240
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 381 gctctatctgagggtgcttctttggagcctaccattcattttgaaagcatggtgctgatt 440
Query: 241 tgtttaatgaacccacccctcaaagacaaacattagaaacaagaagtgacacaggatctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtttaatgaacccacccctcaaagacaaacattagaaacaagaagtgacacaggatctt 500
Query: 301 taactcctaccttcatttcacaaccagggaatgtaaag 338
||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taactcctaccttcatttcacaaccagggaatgtaaag 538
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 738
Length adjustment: 9
Effective length of query: 329
Effective length of database: 729
Effective search space: 239841
Effective search space used: 239841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
