Query= MSMg01no394_g23.b1 MSMg01no394_g23.b1 CHROMAT_FILE:
MSMg01no394_g23.b1 PHD_FILE: MSMg01no394_g23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:39:49 2005
(467 letters)
>mm_chr1_101870614_101871479
Length = 866
Score = 841 bits (435), Expect = 0.0
Identities = 456/463 (98%), Gaps = 1/463 (0%)
Strand = Plus / Plus
Query: 5 gaattcaggtccttatgcctataaggaaagaatttaccaactgaactattactgcgcata 64
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 205 gaattcaggtccttatgcctataaggaaagaatttatcaactgaactattactgcgcata 264
Query: 65 caagtaggttttgtttatttggttttgattggccattttcccctctccatttcttctgtt 124
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 265 caagtaggttttgtttatttggttttgattggccattttcccctctcgatttcttctgtt 324
Query: 125 caagccatttagaaggaagtatattagcaatatgtatgtagtaggtatcttcccctgagt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 caagccatttagaaggaagtatattagcaatatgtatgtagtaggtatcttcccctgagt 384
Query: 185 gacatttgtactcttctaaactcatctcaaagtacaggagagacaggtggtccacatgta 244
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 385 gacatttgtactcttctaaactcatctcaaagtacaggagagataggtggtccacatgta 444
Query: 245 gagatgaaccattaaggatgtatggctgtagctcagttgtagttgagagaaagctaagtt 304
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||
Sbjct: 445 gagatgaaccattaagga-gtatggctgtagctcagttgtagttgagagaaagctaggtt 503
Query: 305 tcttccatgacagacttcaaattggcagttaaggagagtaggcctaaatactgggcaagt 364
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 504 tcttccatgacagacttcaaattggcagttaaggagagtagacctaaatactgggcaagt 563
Query: 365 ttaggcaatcctaggcaagtcaattactaatagaataaaccccagaatccagccttcaca 424
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 564 ttaggcaatcctaggcaagtcaattattaatagaataaaccccagaatccagccttcaca 623
Query: 425 cccagataatagacagccctagtcagttggtttgaagcaagga 467
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 cccagataatagacagccctagtcagttggtttgaagcaagga 666
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 467
Length of database: 866
Length adjustment: 10
Effective length of query: 457
Effective length of database: 856
Effective search space: 391192
Effective search space used: 391192
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no394_g23.g1 MSMg01no394_g23.g1 CHROMAT_FILE:
MSMg01no394_g23.g1 PHD_FILE: MSMg01no394_g23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:39:49 2005
(452 letters)
>mm_chr1_102019876_102020727
Length = 852
Score = 822 bits (425), Expect = 0.0
Identities = 443/449 (98%)
Strand = Plus / Minus
Query: 1 tgagagacatttgtaaagaatagaacagtacccatttggaacagaatggattgaaaaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 tgagagacatttgtaaagaatagaacagtacccatttggaacagaatggattgaaaaaga 390
Query: 61 cacagaaaaaataagagttaacgttttttgagttccagaatgtaaggcaatcaaagcttt 120
|||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||
Sbjct: 389 cacagaaaaaataagagttaacattttttgagttccagaatgtaaggcgatcaaagcttt 330
Query: 121 gacaataacgtcttcctccctctgcccagtcctctgtaactgcctattctaaaagataga 180
||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 329 gacaataacgtcttcctccctctgcccagtcctctgtaactgcctatgctaaaggataga 270
Query: 181 aacgcccagtgatacttcattctctcttggcctgtcatattgtttcacatgcaacttaat 240
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 269 aacgcccagtgatacttcattctctcttggcctgtcatattgtttcacgtgcaacttaat 210
Query: 241 agtatattaataccttattttcatgatatagagaaatcaagctagaagtgagttgtaaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 agtatattaataccttattttcatgatatagagaaatcaagctagaagtgagttgtaaac 150
Query: 301 ttcctccctgaagtttaactttcagagtctcagaagaagtcatgtatacaattgggggag 360
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 149 ttcctccctgaagtttaactttcagagtctcagaagaagtcatgtatacagttgggggag 90
Query: 361 aaaagccatcagcagtcttacacagctgtgaaccctatgaaatatgcaaacaatcagcca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 aaaagccatcagcagtcttacacagctgtgaaccctatgaaatatgcaaacaatcagcca 30
Query: 421 ggtaatatgttacagtgttaaccccttta 449
|||||||||||||||||||||||||||||
Sbjct: 29 ggtaatatgttacagtgttaaccccttta 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 852
Length adjustment: 10
Effective length of query: 442
Effective length of database: 842
Effective search space: 372164
Effective search space used: 372164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
