Query= MSMg01no396_e14.b1 MSMg01no396_e14.b1 CHROMAT_FILE:
MSMg01no396_e14.b1 PHD_FILE: MSMg01no396_e14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:08:22 2005
(342 letters)
>mm_chr1_94081258_94081999
Length = 742
Score = 644 bits (333), Expect = 0.0
Identities = 339/341 (99%)
Strand = Plus / Plus
Query: 1 catgttctgaaagaagagctatggccctagaggtgcactgccccttggcaccccagactc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catgttctgaaagaagagctatggccctagaggtgcactgccccttggcaccccagactc 260
Query: 61 cttgtgccagcatgtggctgtgggaacatgaaaggcaggctttgggctctgaaaaagccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttgtgccagcatgtggctgtgggaacatgaaaggcaggctttgggctctgaaaaagccc 320
Query: 121 aacagaaccattctgaagtagagacaggcctctgccagaaggatgaagcaggctggcttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aacagaaccattctgaagtagagacaggcctctgccagaaggatgaagcaggctggcttg 380
Query: 181 gacagtaccctgggccagcttagtctccacactcattgacaaggaagacagaaacacatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gacagtaccctgggccagcttagtctccacactcattgacaaggaagacagaaacacatt 440
Query: 241 caggctattgttgagagaacagctggggaccacaatcttgttttataatagatctgctag 300
||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caggcaaatgttgagagaacagctggggaccacaatcttgttttataatagatctgctag 500
Query: 301 tcattccagcctagagaaggagaaggggataaaggtgacaa 341
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcattccagcctagagaaggagaaggggataaaggtgacaa 541
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 742
Length adjustment: 9
Effective length of query: 333
Effective length of database: 733
Effective search space: 244089
Effective search space used: 244089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no396_e14.g1 MSMg01no396_e14.g1 CHROMAT_FILE:
MSMg01no396_e14.g1 PHD_FILE: MSMg01no396_e14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:08:22 2005
(288 letters)
>mm_chr1_94256131_94256819
Length = 689
Score = 491 bits (254), Expect = e-143
Identities = 278/286 (97%), Gaps = 1/286 (0%)
Strand = Plus / Minus
Query: 1 tctcctgttccagctgcttac-catagactgatctggaaaatggagctatccatgcctgg 59
||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 486 tctcctgttccagctgcttacacgtagactgatctggaaaatggagctatccatgcctgg 427
Query: 60 cttgggattccacattctctgcagtgtccttacgggcatgtattatttattggaagaggt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 cttgggattccacattctctgcagtgtccttacgggcatgtattatttattggaagaggt 367
Query: 120 agctgcctcgggagtaattctcctttgtaattctctggcagaaggggcagatttgccagc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 agctgcctcgggagtaattctcctttgtaattctctggcagaaggggcagatttgccagc 307
Query: 180 tgcagtcttggcttgtcggggtctcctaaggctgtaaacccctggcatgtaacagccact 239
||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 tgcaggcttggcttgtcagggtctcctaaggctgtaaacccctggcatgtaacagccact 247
Query: 240 ctctgtttttctgccacatctcaaagttggtgtggggtggggggcg 285
||||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 246 ctctgcatgcctgccacatctcaaagttggtgtggggtggggggcg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 689
Length adjustment: 9
Effective length of query: 279
Effective length of database: 680
Effective search space: 189720
Effective search space used: 189720
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
