Query= MSMg01no396_m22.b1 MSMg01no396_m22.b1 CHROMAT_FILE:
MSMg01no396_m22.b1 PHD_FILE: MSMg01no396_m22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:09:02 2005
(386 letters)
>mm_chr1_13347614_13348399
Length = 786
Score = 590 bits (305), Expect = e-173
Identities = 327/335 (97%), Gaps = 3/335 (0%)
Strand = Plus / Minus
Query: 1 aagattgtctgcttgcttgacatatcttaagtgttggtcttagaagcagacactgttatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 aagattgtctgcttgcttgacatatcttaagtgttggtcttagaagcagacactgttatt 275
Query: 61 ctccacagagagattatacttggatctgtcagagaactatctaatgggaactcactgtta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 ctccacagagagattatacttggatctgtcagagaactatctaatgggaactcactgtta 215
Query: 121 aaatcatttgggtgagccgggcatggtggtgcacgcctttaatcctagcactcgggagcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 aaatcatttgggtgagccgggcatggtggtgcacgcctttaatcctagcactcgggagcc 155
Query: 181 agaggcaggcggatatctgagttcaaggccagcctggtctacaaagagagttccaggaca 240
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 154 agaggcaggcggatatctgagttcgaggccagcctggtctacaaagagagttccaggaca 95
Query: 241 gccagagctacttcttagaaaccctgtatcaaaaaatc--aaaaaaaaaaaaatcatttg 298
||||||||||| | ||||||||||| |||||||||| ||||||||||||||||||||
Sbjct: 94 gccagagctac-acagagaaaccctgtctcaaaaaatcaaaaaaaaaaaaaaatcatttg 36
Query: 299 gatggtttgattatagtttaaaacaaaaccacctg 333
|||||||||||||||||||||||||||||||||||
Sbjct: 35 gatggtttgattatagtttaaaacaaaaccacctg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 386
Length of database: 786
Length adjustment: 9
Effective length of query: 377
Effective length of database: 777
Effective search space: 292929
Effective search space used: 292929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no396_m22.g1 MSMg01no396_m22.g1 CHROMAT_FILE:
MSMg01no396_m22.g1 PHD_FILE: MSMg01no396_m22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:09:02 2005
(451 letters)
>mm_chr1_13101700_13102550
Length = 851
Score = 849 bits (439), Expect = 0.0
Identities = 448/451 (99%)
Strand = Plus / Plus
Query: 1 cctggggggaaatctgtcatggctgctcacctgtgagacatctattgcttacacaggggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctggggggaaatctgtcatggctgctcacctgtgagacatctattgcttacacaggggg 260
Query: 61 ctacactatagctgggagccctctgcagacatctgctccatattgaatttgctgccctga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctacactatagctgggagccctctgcagacatctgctccatattgaatttgctgccctga 320
Query: 121 tggacatgcgttatgggcagaggtaaagcaagtgcctaggtagtcaatagatccctgaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggacatgcgttatgggcagaggtaaagcaagtgcctaggtagtcaatagatccctgaga 380
Query: 181 aggggtagcacacatccctagtgcttagggttgtccggggagcacttccacctggcttac 240
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 381 aggggtagcacacatccctagtgcttagggttgtccggggagcacttccaccaggcttac 440
Query: 241 tctggtctgacttgctatatgaatattaatgtgagtttgtggttgcaatgtaatagctag 300
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 441 tctggtctgacttgctatatgaatattaatgtgagtttgtggttgcaatggaatagctag 500
Query: 301 gtggttgacagggcaaggttcctctctaagcagggtccagcaatggtttggcagtttgtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtggttgacagggcaaggttcctctctaagcagggtccagcaatggtttggcagtttgtt 560
Query: 361 aagagtctggcctttgaaggggcaggctttgctttacctctcagaggcaagtgacctccc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 561 aagagtctggcctttgaaggggcaggctttgctttacctctcagaggcaagtgaccttcc 620
Query: 421 gccatttccttcaggtctcatctgcagtggc 451
|||||||||||||||||||||||||||||||
Sbjct: 621 gccatttccttcaggtctcatctgcagtggc 651
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 851
Length adjustment: 10
Effective length of query: 441
Effective length of database: 841
Effective search space: 370881
Effective search space used: 370881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
