Query= MSMg01no396_o07.b1 MSMg01no396_o07.b1 CHROMAT_FILE:
MSMg01no396_o07.b1 PHD_FILE: MSMg01no396_o07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:09:08 2005
(243 letters)
>mm_chr1_149614155_149614797
Length = 643
Score = 410 bits (212), Expect = e-119
Identities = 236/245 (96%), Gaps = 4/245 (1%)
Strand = Plus / Minus
Query: 1 atgtcttggngg-aattttattcttaatcctcagtttggaaaatattaaacttaatagta 59
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Sbjct: 357 atgtctt-gtggtaattttattcttaatcctcagtttggaaaatattaaacttaatagta 299
Query: 60 aatttaaaaatgaaagaaaatgttatagacacccatatttacataccaaagagatgctag 119
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Sbjct: 298 aatttaaaaatgaaagaaaatgttatagacacccatatttacataccaaagagatgctag 239
Query: 120 atgaaggacttcatattaatttcttatgaaggggtttgcatccccagaggaggaacaatt 179
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Sbjct: 238 atgaaggacttcatattaatttcttatgaaggggtttgcatccccagaggaggaacaaca 179
Query: 180 ttatgaactaaccagta--cccccagaactctcagggactaaaccaccaaacaaagagta 237
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Sbjct: 178 atctgaactaaccagtacccccccagaactctcagggactaaaccaccaaacaaagagta 119
Query: 238 cacct 242
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Sbjct: 118 cacct 114
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 643
Length adjustment: 9
Effective length of query: 234
Effective length of database: 634
Effective search space: 148356
Effective search space used: 148356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no396_o07.g1 MSMg01no396_o07.g1 CHROMAT_FILE:
MSMg01no396_o07.g1 PHD_FILE: MSMg01no396_o07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:09:08 2005
(195 letters)
>mm_chr1_149383650_149384244
Length = 595
Score = 325 bits (168), Expect = 1e-93
Identities = 186/192 (96%)
Strand = Plus / Plus
Query: 1 tttagatagatttgtttcagatgttacagcaatgacatgtagtataattaaaatatcagg 60
||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||
Sbjct: 201 tttagatagatttgtttcagacgttacagcaatgacatgtagtgtaattaaaatatcagg 260
Query: 61 cagaatttaaaaatactttgtgtaatccaagcgataatatttatcaaggtgttttaactt 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagaatttgaaaatactttgtgtaatccaagcgataatatttatcaaggtgttttaactt 320
Query: 121 tcttgttttatgtgaataattaataatgtaattacaggcaagttctttcttatatataat 180
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcttgtaacatgtgaataattaataatgtaattacaggcaagttctttcttatatataat 380
Query: 181 caaaatgactgg 192
||||||||||||
Sbjct: 381 caaaatgactgg 392
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 195
Length of database: 595
Length adjustment: 8
Effective length of query: 187
Effective length of database: 587
Effective search space: 109769
Effective search space used: 109769
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
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