Query= MSMg01no397_o09.b1 MSMg01no397_o09.b1 CHROMAT_FILE:
MSMg01no397_o09.b1 PHD_FILE: MSMg01no397_o09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:10:28 2005
(274 letters)
>mm_chr1_195800402_195801075
Length = 674
Score = 489 bits (253), Expect = e-143
Identities = 265/269 (98%)
Strand = Plus / Minus
Query: 6 gaattctctaaaatgtcaaatatttccttcttgatttagaaggaacaaacccataggcaa 65
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 gaattctctaaaatgtaaaatatttccttcttgatttagaaggaacaaacccataggcaa 415
Query: 66 aacgtctaagaagtggaggtttagcatcagccaccccacctgttagccagtcattagtga 125
||| |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 aacatctaagaactggaggcttagcatcagccaccccacctgttagccagtcattagtga 355
Query: 126 ttctcctagctgtactccaaagctttttctagacaaccaacaagggttgctgcccacata 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 ttctcctagctgtactccaaagctttttctagacaaccaacaagggttgctgcccacata 295
Query: 186 tttgcttctcttgactaaggagactaggtgggtccttgttaggctggagtgatggcccag 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 tttgcttctcttgactaaggagactaggtgggtccttgttaggctggagtgatggcccag 235
Query: 246 gtctatcttttgccacttctcaaggatac 274
|||||||||||||||||||||||||||||
Sbjct: 234 gtctatcttttgccacttctcaaggatac 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 274
Length of database: 674
Length adjustment: 9
Effective length of query: 265
Effective length of database: 665
Effective search space: 176225
Effective search space used: 176225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no397_o09.g1 MSMg01no397_o09.g1 CHROMAT_FILE:
MSMg01no397_o09.g1 PHD_FILE: MSMg01no397_o09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:10:28 2005
(289 letters)
>mm_chr1_195656664_195657352
Length = 689
Score = 538 bits (278), Expect = e-157
Identities = 287/290 (98%), Gaps = 2/290 (0%)
Strand = Plus / Plus
Query: 1 taggcaaaagaagatgcaatgctgtctgttgagtttgtgtaattcttggaacactgcaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taggcaaaagaagatgcaatgctgtctgttgagtttgtgtaattcttggaacactgcaag 260
Query: 61 ggaggatgctataaactgtattagtgcagttgtaggaacattaagcaggaaagaaagcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggaggatgctataaactgtattagtgcagttgtaggaacattaagcaggaaagaaagcta 320
Query: 121 ttaattatgtttatttagtgtgtttttagaaacacttggcaagaaatattgctgagaatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttaattatgtttatttagtgtgtttttagaaacacttggcaagaaatattgctgagaatt 380
Query: 181 gagttgagtcactatcattgtagggacactgtttaagagagtatggtatgaactgtgttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gagttgagtcactatcattgtagggacactgtttaagagagtatggtatgaactgtgttg 440
Query: 241 agtta-tngtcattgtgggaatactagggaagagaggaccctggattgtg 289
||||| | |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 441 agttagt-gtcagtgtgggaatactagggaagagaggaccctggattgtg 489
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
