Query= MSMg01no398_c22.b1 MSMg01no398_c22.b1 CHROMAT_FILE:
MSMg01no398_c22.b1 PHD_FILE: MSMg01no398_c22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:10:51 2005
(541 letters)
>mm_chr1_104584448_104585387
Length = 940
Score = 978 bits (506), Expect = 0.0
Identities = 530/538 (98%), Gaps = 1/538 (0%)
Strand = Plus / Minus
Query: 4 ggaattccaacttatgctaaacaaatacattaaacttcatgctgtgttttaagtttaact 63
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 ggaattccaacttaggttaaacaaatacattaaacttcatgctgtgttttaagtttaact 681
Query: 64 gatcagcatttaatggactggagctgctagtacataaagtttaatgggctttgttcccaa 123
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gatcagcaattaatggactggagctgctagtacataaagtttaatgggctttgttcccaa 621
Query: 124 aactttcacatggccctgacctttcagacttccttctattagccccttttcataatattt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 aactttcacatggccctgacctttcagacttccttctattagccccttttcataatattt 561
Query: 184 gctttgtatgtggtttctcagttaatacatagttaatagttattatttttcttgtgtttt 243
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 560 gctttgtatgtggtttctcagttaatacatagttaatagttgttatttttcttgtgtttt 501
Query: 244 taactgctttagtcctatttcaatgtaagggtgaagatttatttgaagaaaatacttgtg 303
||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 500 taactgctttagtcctatttcaatgtaagggtgaaaatttatttgaa-aaaatacttgtg 442
Query: 304 tatatttaacaacacaggtgctcctctggaaattgtacattcaagaatgattaaggtttg 363
|||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 441 tatatttaacaacacaggtgcttctctggaaattgtacattcaagaatgattcaggtttg 382
Query: 364 taataaactgattactatagtcattacatgcaattttgtgtgaataggctttttgattta 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taataaactgattactatagtcattacatgcaattttgtgtgaataggctttttgattta 322
Query: 424 aaaccttggtctagctaagatgagtggtggatttttcctcactgctataatgttaacatt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaccttggtctagctaagatgagtggtggatttttcctcactgctataatgttaacatt 262
Query: 484 tatatttgttgcatttcagaataatgaaacaattccagtttatataatacaaaagatg 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tatatttgttgcatttcagaataatgaaacaattccagtttatataatacaaaagatg 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 541
Length of database: 940
Length adjustment: 10
Effective length of query: 531
Effective length of database: 930
Effective search space: 493830
Effective search space used: 493830
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no398_c22.g1 MSMg01no398_c22.g1 CHROMAT_FILE:
MSMg01no398_c22.g1 PHD_FILE: MSMg01no398_c22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:10:51 2005
(512 letters)
>mm_chr1_104392025_104392936
Length = 912
Score = 905 bits (468), Expect = 0.0
Identities = 501/512 (97%)
Strand = Plus / Plus
Query: 1 atctctctgtgtattgaagaagaccatcttggcattgacaagtatccaatatctggtact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atctctctgtgtattgaagaagaccatcttggcattgacaagtatccaatatctggtact 260
Query: 61 cttttgagacagtggttgtaacatttcagttttctttttaattccattgaccactcatac 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 261 cttttgagacagtggttgtaacatttcagttttctttttaattccagtgaccactcatac 320
Query: 121 aatagcattcaaatatatcaagtaactgaaaacatatgtgacactgaccaaattaaaatg 180
||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 321 aatagcattcaaatatatcaagtaactgaaaacatttatgacactgaccaaattaaaatg 380
Query: 181 actttttaaaacttccaatgaaggaaggtgtttctgtaaactgaatatttccatgtaatg 240
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attttttaaaacttccaatgaaggaaggtgtttctgtaaactgaatatttccatgtaatg 440
Query: 241 tgattatttctatatgaaataattctattatgtatgatttaaagtataatgtttttattt 300
|||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 441 tgattaaaactatattaaataattctattatgtattatttaaagtataatgtttttattt 500
Query: 301 cttcacataaaaatgaattatggctttatttttttaaaaataattcaactaaatgattta 360
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 501 cttcacataaaaatgaattatggctttattttttttaaaataattcaactaaatgattta 560
Query: 361 tgacattatttaatatgttatcaatttgagtttatgttcctgactctcaatgatgtcatt 420
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 561 tgacattatttaatatgttatcaatttgactttatgttcctgactctcaatgatgtcatt 620
Query: 421 catgagtcttctaataaatatgttcttttaataaaggtacattttacacataaacattta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 catgagtcttctaataaatatgttcttttaataaaggtacattttacacataaacattta 680
Query: 481 tgtgtgtataagtatgcgcatatggagaatta 512
||||||||||||||||||||||||||||||||
Sbjct: 681 tgtgtgtataagtatgcgcatatggagaatta 712
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 512
Length of database: 912
Length adjustment: 10
Effective length of query: 502
Effective length of database: 902
Effective search space: 452804
Effective search space used: 452804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
