Query= MSMg01no398_g17.b1 MSMg01no398_g17.b1 CHROMAT_FILE:
MSMg01no398_g17.b1 PHD_FILE: MSMg01no398_g17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:11:08 2005
(565 letters)
>mm_chr1_187185377_187186343
Length = 967
Score = 400 bits (207), Expect = e-115
Identities = 214/217 (98%), Gaps = 2/217 (0%)
Strand = Plus / Plus
Query: 351 tgaagacctcctcagaggcagccactatgattcaaagttggagtttattatgtgattttt 410
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 551 tgaagacctcctcagaggcagccactatgattcaaagttggagtttactatgtgattttt 610
Query: 411 tttttttt--aagcatgggagttgacaggtgctccaaagaggacgcataccacagtcaca 468
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 tttttttttaaagcatgggagttgacaggtgctccaaagaggacgcataccacagtcaca 670
Query: 469 cttcatggtcttagcaagaacactgaagttattatttttaaaggttattaaggaatttgg 528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 cttcatggtcttagcaagaacactgaagttattatttttaaaggttattaaggaatttgg 730
Query: 529 tcatgggctgttcctgaattgttcttttgtttccact 565
|||||||||||||||||||||||||||||||||||||
Sbjct: 731 tcatgggctgttcctgaattgttcttttgtttccact 767
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 565
Length of database: 967
Length adjustment: 10
Effective length of query: 555
Effective length of database: 957
Effective search space: 531135
Effective search space used: 531135
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no398_g17.g1 MSMg01no398_g17.g1 CHROMAT_FILE:
MSMg01no398_g17.g1 PHD_FILE: MSMg01no398_g17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:11:08 2005
(316 letters)
>mm_chr1_187366234_187366949
Length = 716
Score = 603 bits (312), Expect = e-177
Identities = 315/316 (99%)
Strand = Plus / Minus
Query: 1 atcacaaaagggagtttccagaaataaaatattttggagcaaacaagagatgacaactgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 atcacaaaagggagtttccagaaataaaatattttggagcaaacaagagatgacaactgt 423
Query: 61 ataatagtccagagagcaagcagtcctaactagaactggctggagagactcaacagacat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 ataatagtccagagagcaagcagtcctaactagaactggctggagagactcaacagacat 363
Query: 121 ttcccccagcaaggtcctcaaatgagcaggaaagagatcttagacattttgggaaatggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ttcccccagcaaggtcctcaaatgagcaggaaagagatcttagacattttgggaaatggt 303
Query: 181 tgtggttgtattggtaagatgtaactagaacctcaaacaaaccagcattaagacaattta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tgtggttgtattggtaagatgtaactagaacctcaaacaaaccagcattaagacaattta 243
Query: 241 attatgtctatgaaaaacaaggcattgtgtaagaaaggcaaagtgtgtgtgtgtgtgtgt 300
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 attaagtctatgaaaaacaaggcattgtgtaagaaaggcaaagtgtgtgtgtgtgtgtgt 183
Query: 301 gtgtgtgtgtgtgtgt 316
||||||||||||||||
Sbjct: 182 gtgtgtgtgtgtgtgt 167
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 41
Number of extensions: 8
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 716
Length adjustment: 9
Effective length of query: 307
Effective length of database: 707
Effective search space: 217049
Effective search space used: 217049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
