Query= MSMg01no398_k23.b1 MSMg01no398_k23.b1 CHROMAT_FILE:
MSMg01no398_k23.b1 PHD_FILE: MSMg01no398_k23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:11:29 2005
(542 letters)
>mm_chr1_48585914_48586855
Length = 942
Score = 1025 bits (530), Expect = 0.0
Identities = 536/538 (99%)
Strand = Plus / Plus
Query: 4 ggaattcctgacttttctgcctaatagtcctttatatgcatggttaaggatataagagaa 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcctgacttttctgcctaatagtcctttatatgcatggttaaggatataagagaa 263
Query: 64 aataatgtttaaactacaaagtgattttctataatattatggtgagaacattggttatat 123
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 264 aataatgtttaaactacaaagtgatttcctataatattatggtgagaacattggttatat 323
Query: 124 gattcacagacatcctaatcatcctggcaagcagtttagtttgtcttaacttagttcttt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gattcacagacatcctaatcatcctggcaagcagtttagtttgtcttaacttagttcttt 383
Query: 184 gacaatattaaatgtgtttcaattatattcactactccttcctcgacttttcccagattc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gacaatattaaatgtgtttcaattatattcactactccttcctcgacttttcccagattc 443
Query: 244 tacccacccaattttgaactctctccttaacccaatcacaaaggaactcgcacaatatgt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tacccacccaattttgaactctctccttaacccaatcacaaaggaactcgcacaatatgt 503
Query: 304 actcactgataagtggatattagcccagaaacttaggacacccaagatataagatacaac 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 actcactgataagtggatattagcccagaaacttaggacacccaagatataagatacaac 563
Query: 364 ttgccaaacgcatgaaattcaagaagaacgaagaccaaagtgtggacactttaccctttc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ttgccaaacgcatgaaattcaagaagaacgaagaccaaagtgtggacactttaccctttc 623
Query: 424 ttagaaatgggaacaaaacacccatagaaggagtttcagagacaaaatttggagctgtga 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ttagaaatgggaacaaaacacccatagaaggagtttcagagacaaaatttggagctgtga 683
Query: 484 cgaaagggtggaccatctagtgattgccatatgcagggatccatcccataatcagctt 541
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 684 cgaaagggtggaccatctagtgattaccatatgcagggatccatcccataatcagctt 741
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 542
Length of database: 942
Length adjustment: 10
Effective length of query: 532
Effective length of database: 932
Effective search space: 495824
Effective search space used: 495824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no398_k23.g1 MSMg01no398_k23.g1 CHROMAT_FILE:
MSMg01no398_k23.g1 PHD_FILE: MSMg01no398_k23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:11:29 2005
(470 letters)
>mm_chr1_48703142_48704012
Length = 871
Score = 729 bits (377), Expect = 0.0
Identities = 386/389 (99%), Gaps = 1/389 (0%)
Strand = Plus / Minus
Query: 1 tcttatcttgcctgttggagcattcatttcattgtatcttttctgtgtaagtttgggttt 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 tcttatcttgcctgttggaacattcatttcattgtatcttttctgtgtaagtttgggttt 330
Query: 61 ggttttaatatattatttttatcttcttttgtgatagctgattttatttatttcctccca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 ggttttaatatattatttttatcttcttttgtgatagctgattttatttatttcctccca 270
Query: 121 gcctcattctattaactcatgtcacatgttattttggcagg-tttgcacatttatttttc 179
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 269 gcctcattctattaactcatgtcacatgttattttggcaggttttgcacatttatttttc 210
Query: 180 agaggggatttattgagctttgttctggaatgttggtcgataattagaaaactgtaacat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 agaggggatttattgagctttgttctggaatgttggtcgataattagaaaactgtaacat 150
Query: 240 cattgtttttaagattcttgggctaaagtgaagtggaatttgtctaaggtttattaattt 299
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 cattgcttttaagattcttgggctaaagtgaagtggaatttgtctaaggtttattaattt 90
Query: 300 gaactataagccaaatctcttgtggggagtttgcttaatatcctgtgaataatgaggcta 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 gaactataagccaaatctcttgtggggagtttgcttaatatcctgtgaataatgaggcta 30
Query: 360 tctagttagaatatcagaatgagagttta 388
|||||||||||||||||||||||||||||
Sbjct: 29 tctagttagaatatcagaatgagagttta 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 470
Length of database: 871
Length adjustment: 10
Effective length of query: 460
Effective length of database: 861
Effective search space: 396060
Effective search space used: 396060
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
