Query= MSMg01no400_e12.b1 MSMg01no400_e12.b1 CHROMAT_FILE:
MSMg01no400_e12.b1 PHD_FILE: MSMg01no400_e12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:13:32 2005
(465 letters)
>mm_chr1_67142509_67143373
Length = 865
Score = 864 bits (447), Expect = 0.0
Identities = 455/459 (99%), Gaps = 4/459 (0%)
Strand = Plus / Minus
Query: 5 gaattctttaataat--ttcctcactgatctccctggccaagcccttatctgtcccaaga 62
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 457 gaattctttaataataatt--tcactgatctccctggccaagcccttatctgtcccaaga 400
Query: 63 cccctgagctctcttcttagaagtaaatgcatacggagcatccaagaaacccccacattt 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 cccctgagctctcttcttagaagtaaatgcatacggagcatccaagaaacccccacattt 340
Query: 123 caagctagagtcttttttttttaagattagaacttattttatcgagagttgatacaaaac 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 caagctagagtcttttttttttaagattagaacttattttatcgagagttgatacaaaac 280
Query: 183 ctgttctgacatgaccacggttgtgaatgcagaagggcaaaaagttaattgatccatact 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 ctgttctgacatgaccacggttgtgaatgcagaagggcaaaaagttaattgatccatact 220
Query: 243 taagaaacttgatctgggagatggctgtcaaaaaagtgcttgctgtgtgagcatgaggtg 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 taagaaacttgatctgggagatggctgtcaaaaaagtgcttgctgtgtgagcatgaggtg 160
Query: 303 gtcctgaatttgaatcttcacacaatgattggttgtggacacatgcctataatctcagtg 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 gtcctgaatttgaatcttcacacaatgattggttgtggacacatgcctataatctcagtg 100
Query: 363 ttcagtaggcagaactaggaggatccctcaggattcctggctagctaacatagctgaatc 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99 ttcagtaggcagaactaggaggatccctcaggattcctggctagctaacatagctgaatc 40
Query: 423 agcaagctctggaatcagtgggaaacactaaaaagtaaa 461
|||||||||||||||||||||||||||||||||||||||
Sbjct: 39 agcaagctctggaatcagtgggaaacactaaaaagtaaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 465
Length of database: 865
Length adjustment: 10
Effective length of query: 455
Effective length of database: 855
Effective search space: 389025
Effective search space used: 389025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no400_e12.g1 MSMg01no400_e12.g1 CHROMAT_FILE:
MSMg01no400_e12.g1 PHD_FILE: MSMg01no400_e12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:13:32 2005
(173 letters)
>mm_chr1_66985774_66986346
Length = 573
Score = 335 bits (173), Expect = 1e-96
Identities = 173/173 (100%)
Strand = Plus / Plus
Query: 1 ttaatttttataatgtaaatacttaaaatattgtagctaagaaattatgatttttctgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttaatttttataatgtaaatacttaaaatattgtagctaagaaattatgatttttctgga 260
Query: 61 atacaaattattcttgggacagccatgataaatgaatactaattattcttctagagactg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atacaaattattcttgggacagccatgataaatgaatactaattattcttctagagactg 320
Query: 121 atggcatacatgaaccttagaatggaaatcttactttagctatcaggacaaac 173
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atggcatacatgaaccttagaatggaaatcttactttagctatcaggacaaac 373
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 173
Length of database: 573
Length adjustment: 8
Effective length of query: 165
Effective length of database: 565
Effective search space: 93225
Effective search space used: 93225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
