XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCGAGGATCCGCGGAA
TTCCTGGCTCCTTGTCACCTACCAGAGTCTACAAGGGGAAGGAGAGAGCC
GGAGAGAAAGAAAAACAAAAAGGAAAAGAAAATAGCTCCTAAATTAAACT
TCTCACATTCCAACCTTAAAAGTTCCCTTTCTGGAGAGCAAAGTCTCCCA
GAGCCAGCCTTAGAAAACTTAAAGAAACCTCAGAAACCCGACCAGAAATC
TACGAGTAAATAGCTTAAAATATATCAGCTGGGGTGTCAAAGAAGCTCCA
GTTTTCTATCTCCAAAGCTCTAAAATGCATCTGGGGTGTCCGCTCACCTC
ATAGATGTCTTCGTACTTGACATTCTCCACGAGTTTCCAGAGCATGATCG
CAGCCTGGTCTCTAGGAGGTGAGTGCATTCATGTGAGGAGCAGATGTCTG
GTTTCTCAGGACTCCGCTGTCTGTAATGATCCATCTATAATTGGAAATGG
GGGATACACACCAAATCCGACGCTCCTCTCCCATCGCAACTTATATCTGT
TGTCTCAAACAATAGGCTGGAGAAATAAGCCTCAGCAGAAGGAAAAACAT
TATTGCACACAGGACTTAGATACAACGCGCACGCATACACACACACTCAC
CCACACATATATTCGTCTTTTTACATACATCTACATATTTTCATATTGTG
GGGCGGGGGGGCCGCGTGACTCATCCCCCTCGCCATGTGCCCTTTTTATA
ACTTTACAAGATACCTTTCAGGTAATTCTTCTTCTCCTAAATCTC

TGCTGTGGGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXTGAGTATATTGGGATTGAACTTAAGACTGGAGAAA
GAGAGAGTTTGAGGCGGGAGGGACAGAGAGAGCCANNCCCCCCCCCCCCT
TTCCTTCTTCCCTCCTCTCCCTCCTCTCTTCTCCCTCTTTTTCTTCCTTT
CTTTCTCTTTCTTTTTTCTTTCCCCCCCCTTCTCTTTCCCTTCTTTCTTT
TTTTTCCTGCCTTTCTTCTCCCTCCTTTCCCCTTTTTTTTCCCCCCCCCC
GGCCCCCCCTTTTTCTCTTTTCCCCGCCCCCCCTCCGCCCCTCCGTTTTT
CTTTTTTTTTCCCCCCCCCTCTCTCCCTTTTCTCTCTCTTCTCTCCTCTT
TTTTTTCCCCCCCCCTTTCTTTTTTTTTTTTCCTCTTTCTTCCTCTTCCC
TCCTTTCTTCCCCCTTCCCCCCTCTTCCCTCTTCTTTTCCTCCTTCCTTC
CTTTCCTCTTCCTTTTTTCTCCTTCCTTTTCCCTTTCCCTTCCTCCTCTC
TCTCCTCTCTCCCTTCCTTTCCCTCTCTTCTCTTTCCCTTTTCTCCTCCC
TCTCTCTCTCTTTTTTTTTCTTTTTCTCTTTTTTTTTCTTCTCCCTCCCT
TCTTCCTCCTCCCCCTCCTTTTCTTTCTTCCCTCTCTCTTTCTCTTTCTC
CCTCCCCCTTTTTTCCTCCTCTCCCTTTTCTTCCCCCTCTTCCCCCTCTC
CTCTCCTCTTTCTCTTTCCCCCTTCCCTCCCCTCTCCCTTCTCCTCTTTC
TTCTCTCCGTTCTTCTTTTCTTTCTCTTCTTTTCCTCCTCCCCCCTCTCT
CTCCTCT

Query= MSMg01no400_h06.b1 MSMg01no400_h06.b1 CHROMAT_FILE:
MSMg01no400_h06.b1 PHD_FILE: MSMg01no400_h06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:13:46 2005
         (509 letters)



>mm_chr1_19198921_19199829
          Length = 909

 Score =  946 bits (489), Expect = 0.0
 Identities = 501/505 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcctggctccttgtcacctaccagagtctacaaggggaaggagagagccggagaga 64
           ||||||||||||||  || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 gaattcctggctccacgttacctaccagagtctacaaggggaaggagagagccggagaga 650

                                                                       
Query: 65  aagaaaaacaaaaaggaaaagaaaatagctcctaaattaaacttctcacattccaacctt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 aagaaaaacaaaaaggaaaagaaaatagctcctaaattaaacttctcacattccaacctt 590

                                                                       
Query: 125 aaaagttccctttctggagagcaaagtctcccagagccagccttagaaaacttaaagaaa 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 aaaagttccctttctggagagcaaagtctcccagagccagccttagaaaacttaaagaaa 530

                                                                       
Query: 185 cctcagaaacccgaccagaaatctacgagtaaatagcttaaaatatatcagctggggtgt 244
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 cctcagaaacccgatcagaaatctacgagtaaatagcttaaaatatatcagctggggtgt 470

                                                                       
Query: 245 caaagaagctccagttttctatctccaaagctctaaaatgcatctggggtgtccgctcac 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 caaagaagctccagttttctatctccaaagctctaaaatgcatctggggtgtccgctcac 410

                                                                       
Query: 305 ctcatagatgtcttcgtacttgacattctccacgagtttccagagcatgatcgcagcctg 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 ctcatagatgtcttcgtacttgacattctccacgagtttccagagcatgatcgcagcctg 350

                                                                       
Query: 365 gtctctaggaggtgagtgcattcatgtgaggagcagatgtctggtttctcaggactccgc 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 gtctctaggaggtgagtgcattcatgtgaggagcagatgtctggtttctcaggactccgc 290

                                                                       
Query: 425 tgtctgtaatgatccatctataattggaaatgggggatacacaccaaatccgacgctcct 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 tgtctgtaatgatccatctataattggaaatgggggatacacaccaaatccgacgctcct 230

                                    
Query: 485 ctcccatcgcaacttatatctgttg 509
           |||||||||||||||||||||||||
Sbjct: 229 ctcccatcgcaacttatatctgttg 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 509
Length of database: 909
Length adjustment: 10
Effective length of query: 499
Effective length of database: 899
Effective search space:   448601
Effective search space used:   448601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)