Query= MSMg01no403_f20.b1 MSMg01no403_f20.b1 CHROMAT_FILE:
MSMg01no403_f20.b1 PHD_FILE: MSMg01no403_f20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:17:37 2005
(458 letters)
>mm_chr1_6465753_6466610
Length = 858
Score = 886 bits (458), Expect = 0.0
Identities = 458/458 (100%)
Strand = Plus / Minus
Query: 1 caaaggccagctgtttgcctccagatgtttttggaaaccaccaatgctcttttaaactct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 caaaggccagctgtttgcctccagatgtttttggaaaccaccaatgctcttttaaactct 599
Query: 61 gagtccggacagagacagagatgttacaaacataaaatagctgctttatgatacctttaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 gagtccggacagagacagagatgttacaaacataaaatagctgctttatgatacctttaa 539
Query: 121 attaatttcttttatcattaaaataaaaagaagaacagatggtgaagacttagtttaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 attaatttcttttatcattaaaataaaaagaagaacagatggtgaagacttagtttaaag 479
Query: 181 tgagaacaattaaaataatcgcagctggagatagagtttctatcaggaatctgtgagcca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 tgagaacaattaaaataatcgcagctggagatagagtttctatcaggaatctgtgagcca 419
Query: 241 taagcaattaggcaacatttaaacgtggctctttaataagagaatctacagtgtgataat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 taagcaattaggcaacatttaaacgtggctctttaataagagaatctacagtgtgataat 359
Query: 301 tatattccataaactaaactggtatatagcaaacacattaggaatctcatattatgtaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 tatattccataaactaaactggtatatagcaaacacattaggaatctcatattatgtaag 299
Query: 361 agggttagaagtggtaaaatgctaccaaaagaaccaaaatactttacacatgctgacaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 agggttagaagtggtaaaatgctaccaaaagaaccaaaatactttacacatgctgacaca 239
Query: 421 gccatacatttcttcaaaaatacagtcagtgtaattgt 458
||||||||||||||||||||||||||||||||||||||
Sbjct: 238 gccatacatttcttcaaaaatacagtcagtgtaattgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 458
Length of database: 858
Length adjustment: 10
Effective length of query: 448
Effective length of database: 848
Effective search space: 379904
Effective search space used: 379904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no403_f20.g1 MSMg01no403_f20.g1 CHROMAT_FILE:
MSMg01no403_f20.g1 PHD_FILE: MSMg01no403_f20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:17:37 2005
(326 letters)
>mm_chr1_6207587_6208313
Length = 727
Score = 578 bits (299), Expect = e-169
Identities = 320/327 (97%), Gaps = 1/327 (0%)
Strand = Plus / Plus
Query: 1 tttttgcattatggacctaggaagcttagtttgcttatcataaaactgatcattgtctaa 60
||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||
Sbjct: 201 tttttgcattatggacctaggaagcgtagtttgcttatcataaaactgattattgtctaa 260
Query: 61 ggtcctaaaagcattacttttcc-ttttacccttctgttaagtttagtgagtctgcaagt 119
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggtcctaaaagcattacttttcctttttacccttctgttaagtttagtgagtctgcaagt 320
Query: 120 gtgtgcagaacttgagtggtcataaggagacttagtagtttcagctttctcagatgttta 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtgtgcagaacttgagtggtcataaggagacttagtagtttcagctttctcagatgttta 380
Query: 180 atgagtgccctcaagattactgatttttgctggatttaattctaatattattgacttgta 239
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgagtgcccttaagattactgatttttgctggatttaattctaatattattgacttgta 440
Query: 240 attatgattataaaaacgtagtgatctgttttcattgtttgagacatcagtttttccttc 299
||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 attatgaaaacaaaaacgtagtgatctgttttcattgtttgagacatcagtttttccttc 500
Query: 300 actatccatataaaaattggtcagtag 326
|||||||||||||||||||||||||||
Sbjct: 501 actatccatataaaaattggtcagtag 527
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 326
Length of database: 727
Length adjustment: 9
Effective length of query: 317
Effective length of database: 718
Effective search space: 227606
Effective search space used: 227606
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
