Query= MSMg01no404_c19.b1 MSMg01no404_c19.b1 CHROMAT_FILE:
MSMg01no404_c19.b1 PHD_FILE: MSMg01no404_c19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:18:44 2005
(452 letters)
>mm_chr1_106029122_106029973
Length = 852
Score = 789 bits (408), Expect = 0.0
Identities = 428/436 (98%), Gaps = 4/436 (0%)
Strand = Plus / Minus
Query: 4 gaattccacacagtt--ttcttttctagaaactgtatgtttcatgagtttggaaatgaga 61
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 gaattccacacagttgat--ttttctagaaactgtatgtttcatgagtttggaaatgaga 522
Query: 62 gatatacaatattacaaggtaagctgattttgtgtcagcatggatgacaagtgttactat 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 gatatacaatattacaaggtaagctgattttgtgtcagcatggatgacaagtgttactat 462
Query: 122 aaggtcagtttgtgattgacatttagaagtaattctttatatttgaagatggggcatgga 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 aaggtcagtttgtgattgacatttagaagtaattctttatatttgaagatggggcatgga 402
Query: 182 tgaatgttttaatatttttatatacttcatttctgaaagtatataagatggagaaaacaa 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 tgaatgttttaatatttttatatacttcatttctgaaagtatataagatggagaaaacaa 342
Query: 242 gcaagggtgaagacaacttaggtgaagccttttgagattttataaagacatgagcatatg 301
||||||||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 341 gcaagggtgaagacaacttaggtgaagccttttgagaaagtagaaagacatgagcatatg 282
Query: 302 cgttacccatgcaaccaagagacttcaattataatggtgttataagtatagagattttta 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 cgttacccatgcaaccaagagacttcaattataatggtgttataagtatagagattttta 222
Query: 362 gcctcctcccttttgtttacacacacacacacacacacacacacacacacacacacacac 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 gcctcctcccttttgtttacacacacacacacacacacacacacacacacacacacacac 162
Query: 422 acacatatatatatat 437
||||||||||||||||
Sbjct: 161 acacatatatatatat 146
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 67
Number of extensions: 20
Number of successful extensions: 20
Number of sequences better than 10.0: 1
Number of HSP's gapped: 17
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 852
Length adjustment: 10
Effective length of query: 442
Effective length of database: 842
Effective search space: 372164
Effective search space used: 372164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no404_c19.g1 MSMg01no404_c19.g1 CHROMAT_FILE:
MSMg01no404_c19.g1 PHD_FILE: MSMg01no404_c19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:18:45 2005
(449 letters)
>mm_chr1_105873285_105874133
Length = 849
Score = 830 bits (429), Expect = 0.0
Identities = 444/449 (98%)
Strand = Plus / Plus
Query: 1 cataaaaattaaaatacaacaaagttgtgacaatatttaaaaatgcaaaggagtaaagta 60
|||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||
Sbjct: 201 cataaaaattaaaatacagcaaagttgtgacaatatttaaaaatgcgaaggagtaaagta 260
Query: 61 ctttggtttgatataatgaacttgtcttctcatatttgtctctgattatgtttaggagct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctttggtttgatataatgaacttgtcttctcatatttgtctctgattatgtttaggagct 320
Query: 121 gcggacataaactttcataatgccatggcattttgcctttaatataaggaagcccaagat 180
||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 321 gcggacataaactttcataatgccatggcattttgccttcaatgtaaggaagcccaagat 380
Query: 181 cctgaaatatgattatatgaaaatttacattttgtgagaaatgctgagtggtagaaaaaa 240
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 381 cctgaaatatgattatatgaaaatttacattttgtgagaaatgccgagtggtagaaaaaa 440
Query: 241 atttatagcaaattgttttactttacatttttaataagtaagaatgaagctatattgtaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atttatagcaaattgttttactttacatttttaataagtaagaatgaagctatattgtaa 500
Query: 301 gaatcttctataccaggaacactaaaatttacatgaaaaataaattcagggaagttattg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaatcttctataccaggaacactaaaatttacatgaaaaataaattcagggaagttattg 560
Query: 361 agaatatgagtgtaacagaaccaacatttgtccatgataattactctaggaggctcctta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agaatatgagtgtaacagaaccaacatttgtccatgataattactctaggaggctcctta 620
Query: 421 ggagaggcaaaaatttgctctgaaataat 449
|||||||||||||||||||||||||||||
Sbjct: 621 ggagaggcaaaaatttgctctgaaataat 649
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 449
Length of database: 849
Length adjustment: 10
Effective length of query: 439
Effective length of database: 839
Effective search space: 368321
Effective search space used: 368321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
