Query= MSMg01no404_i10.b1 MSMg01no404_i10.b1 CHROMAT_FILE:
MSMg01no404_i10.b1 PHD_FILE: MSMg01no404_i10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:19:14 2005
(247 letters)
>mm_chr1_54238536_54239182
Length = 647
Score = 470 bits (243), Expect = e-137
Identities = 246/247 (99%)
Strand = Plus / Plus
Query: 1 gccttgcactcacagagatccacctgcctctgcctcccacctgagtgttgggattaaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gccttgcactcacagagatccacctgcctctgcctcccacctgagtgttgggattaaagg 260
Query: 61 tgtgcactaacactggctggcctagatgttaattttttaaaccagcagagaaaatgaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtgcactaacactggctggcctagatgttaattttttaaaccagcagagaaaatgaatt 320
Query: 121 cctatagaagaattttcaagatagaaaataaactactttgttttataatcagttcagctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctatagaagaattttcaagatagaaaataaactactttgttttataatcagttcagctc 380
Query: 181 atcagccattcattgagccagatcatgccaaatgctacacttcaaaggtaaataagaaga 240
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aacagccattcattgagccagatcatgccaaatgctacacttcaaaggtaaataagaaga 440
Query: 241 aattaat 247
|||||||
Sbjct: 441 aattaat 447
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 647
Length adjustment: 9
Effective length of query: 238
Effective length of database: 638
Effective search space: 151844
Effective search space used: 151844
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no404_i10.g1 MSMg01no404_i10.g1 CHROMAT_FILE:
MSMg01no404_i10.g1 PHD_FILE: MSMg01no404_i10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:19:14 2005
(241 letters)
>mm_chr1_54443088_54443729
Length = 642
Score = 453 bits (234), Expect = e-132
Identities = 240/242 (99%), Gaps = 1/242 (0%)
Strand = Plus / Minus
Query: 1 gaaaacac-aggcttacagggttagacatttaagtgccagaattcaatgaggaaatagaa 59
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaaaacacaaggcttacagggttagacatttaagtgccagaattcaatgaggaaatagaa 322
Query: 60 aaaacagttttaagaagacaaaatagaaaaagggctgaaaattttttcagagaatttaac 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaacagttttaagaagacaaaatagaaaaagggctgaaaattttttcagagaatttaac 262
Query: 120 attccaaaatgtcatgacattatggcagttaattactatttcttatatttcatttataat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attccaaaatgtcatgacattatggcagttaattactatttcttatatttcatttataat 202
Query: 180 ttgccacggtactccggtcgagtcagcctgtcaggcagggatgcctaaaagctgctcatg 239
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgccacggcactccggtcgagtcagcctgtcaggcagggatgcctaaaagctgctcatg 142
Query: 240 ag 241
||
Sbjct: 141 ag 140
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 642
Length adjustment: 9
Effective length of query: 232
Effective length of database: 633
Effective search space: 146856
Effective search space used: 146856
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
