Query= MSMg01no405_d18.b1 MSMg01no405_d18.b1 CHROMAT_FILE:
MSMg01no405_d18.b1 PHD_FILE: MSMg01no405_d18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:20:09 2005
(483 letters)
>mm_chr1_149003886_149004769
Length = 884
Score = 799 bits (413), Expect = 0.0
Identities = 446/457 (97%), Gaps = 5/457 (1%)
Strand = Plus / Minus
Query: 5 gaattctcaattttaacattctccttattca-tttgagatttatatcaaaacatggcaaa 63
|||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 454 gaattctcaattttaaaattctccttattcattttgagatttatatcaaaacatggcaaa 395
Query: 64 tatatcctttaaatt-gcagcacatttcctctaccaatttttagatttccttagacattc 122
|||||| |||||||| | ||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 394 tatatcttttaaattag-agcacattttctctaccaatttttagatttccttagacattc 336
Query: 123 aaaaacatatatcttttaggtaaaattacctcttttttaaaagaaagaagacacaccatc 182
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 ataaacatatatcttttaggtaaaattacctcttttttaaaagaaagaagacacaccatc 276
Query: 183 attttattatattgaagatcaatataacatggaatattaatgtattgaaggctaatctat 242
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 attttattatattcaagatcaatataacatggaatattaatgtattgaaggctaatctat 216
Query: 243 tagaaacttcattatcataatataaatcacataacaaaaagttgacttagtgaaagaata 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 215 tagaaacttcattatcataatataaatcacataacaaaaagttgacttagtgaaaaaata 156
Query: 303 cacatgtacttagctgtttgtacattcactgtcttgagcaactaatactgaaactaactt 362
|||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||
Sbjct: 155 cacatgtacttagctgtttgtacattcact-tcttgagcaa-taatactgaaactaactt 98
Query: 363 tggggtattttcatcaaatataaaatctaaacaagacctctacttactagcatttactct 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97 tggggtattttcatcaaatataaaatctaaacaagacctctacttactagcatttactct 38
Query: 423 ccatcttctccacatatccagttctaaataacaatta 459
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Sbjct: 37 ccatcttctccacatatccagttctaaataacaatta 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 483
Length of database: 884
Length adjustment: 10
Effective length of query: 473
Effective length of database: 874
Effective search space: 413402
Effective search space used: 413402
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no405_d18.g1 MSMg01no405_d18.g1 CHROMAT_FILE:
MSMg01no405_d18.g1 PHD_FILE: MSMg01no405_d18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:20:09 2005
(127 letters)
>mm_chr1_148839441_148839967
Length = 527
Score = 246 bits (127), Expect = 5e-70
Identities = 127/127 (100%)
Strand = Plus / Plus
Query: 1 actacataaaaacagaaataagatgttttgtggagaaaagaagtttcttttgccccctac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actacataaaaacagaaataagatgttttgtggagaaaagaagtttcttttgccccctac 260
Query: 61 ttgaggttcaataatttcagtttaggaaacaaaatgagaatggacagacaaatatgaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgaggttcaataatttcagtttaggaaacaaaatgagaatggacagacaaatatgaaga 320
Query: 121 aatatgt 127
|||||||
Sbjct: 321 aatatgt 327
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 127
Length of database: 527
Length adjustment: 8
Effective length of query: 119
Effective length of database: 519
Effective search space: 61761
Effective search space used: 61761
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
