NATCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTCATATTGTTTCCCTGAACTGTAGAGTGAGGGCTATTATGGTT
GGAAAGGCCAAATGGAAGCCTTTAGAGTTGCCTCTGCCAAAGAAAATAGT
GAATCAAAAACAGTATCGTATTCCTGGAGGCATTGCAGAAATTACTGCCA
CTATCAAGGATTTGAAAGATGCAGGGGTGGTGGTTCCCACCACATCTCCG
TTTAACTCTCCTATCTGGCCAGTGCAGAAAACAGATGGATCATGGAGAAT
GACAGTTGATTACCGAAAACTAAATCTTTTGGTAACTCCAATTGCAGCTG
CTGTACCAGATGTAGTTTCGTTACTTGAGCAAATTAACACATCTCCTGGC
ACCTGGTATGCGGCTATTGATCTGGCAAATGCCTTCTTCTCAGTACCTGT
CCATAAGGACCACCAGAAGCAATTTGTTTTCAGCTGGCAAGGCCAACAGT
ATACTTTCACAGTTTTGCCTCAAGGATATATTAACTCTCCTGCCCTGCGT
CATAATTTATTCAGAAGGGATCTTGATTGTCTGGATCTCCCCCACCATAT
TTCCTTGCTGCCCTATTTTGACGACTCTTTCCTGATCGTACCTACCGAGC
AGGAAGTATTTCCTTTTTTTTCACTCCATCGTGAATCCCTATTGTTTATC
TTCACTATTCCCATCATTCCCCTCTCTCCACTCTTTGCTCCCTTTTTCCT
CCCTTCTTTN

NCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAGGAAAGTGGTTGCATCCTGGCTG
CGTATTGTGGGTCAGCAGGCTGATTCAGAACAGCAGTGAGAACTGTGTTG
GACTGGGACTTATCACAAGCGCTCTTTAGTGGATAGAACTATGGACGCCA
GCTTCTCTTCACAACGTAAAATATGCCAGAGCAGGCAGCATTCCCCTCCC
CCACCCCCACAAAGCTCTCACCTCCATATGTGCATGGCTCTTGTGGTGGT
TCCATTCCTGGAGCCTGCAATGAAGGGTCAGCTGCTTAGAGAGGGCTGGC
ACTGTTCTTTAAGGATTCGGTAACTGTATCTACTGAGTCTCCCAATCTAC
TCCTCTCCTGCATGTTGCTCAGCCGCAGTCTGTAGCTGAGTCGTTAAATG
TTTCATCCAGTCGGCTTCTAATCCACACAGAGAGGTTTAACATTATTCTT
AGATGCTCCGTCTTCAGTGGGTAACAGTACAGTGAATGTTAGCAGGTGAA
TACATGTATAGATGTGTGAATGAGTTCTTCCTGGCGCTTGCGTACTGTTT
CTTTCCTTCTTGGAAGGCAAAATTAACGGAAAACTTACACCTCTTGTACC
TATCTTTTTTTTTTGTGACCATTACTTACCCTAACACTTGTTCCCTCCCT
TTTCCTCCCTTCTAAAACATTCCCGGGTTTTTTCATACCCTCATTTCCTG
CTTTTTT

Query= MSMg01no410_i20.g1 MSMg01no410_i20.g1 CHROMAT_FILE:
MSMg01no410_i20.g1 PHD_FILE: MSMg01no410_i20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:27:19 2005
         (461 letters)



>mm_chr1_41008474_41009334
          Length = 861

 Score =  652 bits (337), Expect = 0.0
 Identities = 386/405 (95%), Gaps = 6/405 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   aggaaagtggttgcatcctggctgcgtattgtgggtcagcaggctgattcagaacagcag 60
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||
Sbjct: 201 aggaaagtggttgcatcctggatgcgtattgtgggtcagcaggctgattcagaatggcag 260

                                                                       
Query: 61  tgagaactgtgttggactgggacttatcacaagcgctctttagtggatagaactatggac 120
           |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| 
Sbjct: 261 tgagaactgtgttggactgggacttatcacaagctctctttagtggatagaattatggat 320

                                                                       
Query: 121 gccagcttctcttcacaacgtaaaatatgccagagcaggcagcattcccctcccccaccc 180
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gccagcttctcttcacaacataaaatatgccagagcaggcagcattcccctcccccaccc 380

                                                                       
Query: 181 ccacaaagctctcacctccatatgtgcatggctcttgtggtggttccattcctggagcct 240
           || ||||||||||||||||||||||||||||||||||||||   ||||||||||||||||
Sbjct: 381 ccgcaaagctctcacctccatatgtgcatggctcttgtggt---tccattcctggagcct 437

                                                                       
Query: 241 gcaatgaag---ggtcagctgcttagagagggctggcactgttctttaaggattcggtaa 297
           |||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 gcaatgaagaagggtcagctgcttagagagggctggcactgttctttaaggattcggtaa 497

                                                                       
Query: 298 ctgtatctactgagtctcccaatctactcctctcctgcatgttgctcagccgcagtctgt 357
           |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 498 ctgtatctactgagtctcccaatctactcctctcctgcatgttgctcagctgtagtctgt 557

                                                        
Query: 358 agctgagtcgttaaatgtttcatccagtcggcttctaatccacac 402
           | |||||| ||||||||||||||||||| ||||||||||||||||
Sbjct: 558 aactgagtggttaaatgtttcatccagtgggcttctaatccacac 602


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 461
Length of database: 861
Length adjustment: 10
Effective length of query: 451
Effective length of database: 851
Effective search space:   383801
Effective search space used:   383801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)