Query= MSMg01no411_b22.b1 MSMg01no411_b22.b1 CHROMAT_FILE:
MSMg01no411_b22.b1 PHD_FILE: MSMg01no411_b22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:28:03 2005
(565 letters)
>mm_chr1_83092322_83093286
Length = 965
Score = 600 bits (310), Expect = e-175
Identities = 339/354 (95%), Gaps = 10/354 (2%)
Strand = Plus / Minus
Query: 5 gaattcttctccatgatcactttcccaaacaccgctaaaagtacagaagttcaggaagtc 64
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 gaattcttctccgtgatcactttcccaaacaccgctaaaagtacagaagttcaggaagtc 294
Query: 65 ccctcagaggcgcctgctatcatttgtttacataaggttttattttacatcacttgtata 124
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 ccctcagaggagcctgctatcatttgtttacataaggttttattttacatcacttgtata 234
Query: 125 ctgcttgggaattaaaacatttggggggggttc---------tttttttttgttctttgg 175
|||||||||||||||||||||| |||||||||| |||||||||||||||||
Sbjct: 233 ctgcttgggaattaaaacattt-gggggggttcttttttttttttttttttgttctttgt 175
Query: 176 ttttttactctttttccccctttccattctctttctgtatttctggccttttcttttcct 235
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 174 ttttttactctttttccccctttccattctttttctgtatttctggccttttcttttcct 115
Query: 236 actttttctttcttattagttttacacccataacatattgaaataggacacattttgcct 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 actttttctttcttattagttttacacccataacatattgaaataggacacattttgcct 55
Query: 296 tcttcttctgcccatttttttcttcctttctttcttccttctttccttccttcc 349
|||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54 tcttcttctgtccatttttttcttcctttctttcttccttctttccttccttcc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 565
Length of database: 965
Length adjustment: 10
Effective length of query: 555
Effective length of database: 955
Effective search space: 530025
Effective search space used: 530025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no411_b22.g1 MSMg01no411_b22.g1 CHROMAT_FILE:
MSMg01no411_b22.g1 PHD_FILE: MSMg01no411_b22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:28:04 2005
(509 letters)
>mm_chr1_82911571_82912479
Length = 909
Score = 946 bits (489), Expect = 0.0
Identities = 504/509 (99%), Gaps = 1/509 (0%)
Strand = Plus / Plus
Query: 1 agaactgtcccaactttccacttcctcctcctccctccccccacccccgtttcccaccct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agaactgtcccaactttccacttcctcctcctccctccccccacccccgtttcccaccct 260
Query: 61 cccaagtttcatgcatgcatgtgctatcacattgcccttctctaccatgtggcctttggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cccaagtttcatgcatgcatgtgctatcacattgcccttctctaccatgtggcctttggg 320
Query: 121 tcttcctgtattagaagccactctgtaactatttcctcatctcagagatagttctggaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 321 tcttcctgtattagaagccactctgtaactatttcctcatctcagagatagttctgggca 380
Query: 181 cacatgagcacgctacagcttttgacagcaggtgacagctgttatcaacatctcacaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cacatgagcacgctacagcttttgacagcaggtgacagctgttatcaacatctcacaaat 440
Query: 241 gtaatgcttaatcttgaggaagagattgctttgtgttctttttgagacagactttcatgt 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ataatgcttaatcttgaggaagagattgctttgtgttctttttgagacagactttcatgt 500
Query: 301 agcccaggctggtccctaactccctatatggatgaggctgaccccaaacttttgatcctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agcccaggctggtccctaactccctatatggatgaggctgaccccaaacttttgatcctc 560
Query: 361 ctgctgttatctcccaagtactaggattataaggatacaccaccatgcctagcgatactc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctgctgttatctcccaagtactaggattataaggatacaccaccatgcctagcgatactc 620
Query: 421 ttaacagatcttttcctttcaaaataagggtctactgccactgagctacatccatagcca 480
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttaacagatcgtttcctttcaaaataagggtctactgccactgagctacatccatagcca 680
Query: 481 caagagttttttttttaagttgctctcct 509
|||||||||| |||| |||||||||||||
Sbjct: 681 caagagttttctttt-aagttgctctcct 708
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 509
Length of database: 909
Length adjustment: 10
Effective length of query: 499
Effective length of database: 899
Effective search space: 448601
Effective search space used: 448601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
