TATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTCAACTGTGGACTACCGAATGGCTGAGAAGCACCTAAAAATATGTT
CAACATCCTTAGTCATCAGGAAAATGCAAATCAAAACAACCCTGAGATTC
CACCTCACACCAGTCAGAATGGCTAAGATCAAAAACTCAAGTGACAGAAG
ATACTGGTGAGGATGTGGAGAAAAAGGAACACTCCTCCATTGCTGGTGAA
CTGAAAACTGGTACAACCACTCTGGAAATCAGTTTGGTGGTTCCTCAGAA
AATTGGACATAGTACTACCAGAACATCCAGCAATACCCAATCCTGGGCAT
ATACCCAGAAGATGCTTCAACATGTAATAAGGACACATGCTCCACTATGT
TCATCCAGCCTTATTAATAATAGCCAGAAGCTGAAAATAATCCAGATGTC
CCTCAACAGAAGAATGGATACAGAAAATGTGGTACATTTACACCATGGAG
TATAGACAGCTATTAAAAACAATGAATTTATGAAATGGATGGATCTTGAG
GATATCATCCTGAGTGAGGTAGCCCAATCACAAAAGAACAGATATGATAT
GCACTCACTAATAAGTGGATATTAGCCCAGAAGCTCAGAATACCCAAGAT
ACAATTTGCAAAACACATGAAACTCAAGAAGAACGAAGAGNCAGGGGTGG
ATACTTTGATCCTTCTTAGAAGGGGAAACAAAACACCCATTATAGGGGGT
ACTGAGACAAGGTATGGAGCAAATACTGA

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXATGATGGCTGCTCATGAGGACTTGGGAGTGGCC
ATTTAGGTGACACCTTCCATTTGATTTGGGATTTCTCAGTTTCCCCCCCC
CCCCCCGGGGATAATCAAATTGATTCACTCTCCACAAGGTAATAGTTTTA
ACCTCTTGATTTCTGATGTTACTAATTTACAGAGCAATATTCATTTGCTT
TCAGAAAGTATTAAAGTGGCTACAACAAAAGAGAGCTATAACAAAGGCAG
TTTAAAAAAAGACAGGTTAGCTAAGTCTTTCCGTAGGAAATATGTCAAAC
ACATTAACCACCTAGATTAATATTGTCAGTGGAATAAACTAATAACTTTG
ACTCAGACTTCAAACAGCCAGGGCAGCAAGGGAAATCATGATTATATAAG
CCTAATTACTTGATAAAAAGAAATGTAACTTTATTCCAGGCAGTAATTTT
CATGGAGTTGAAACAAGAAGAAAGGGCATAGGGTGGAGGGGAGGTCAGAG
CACCCAGCTGGGGAGGCCCTGCTTCCTTATTATCCAGCAGCTTGGTCTGG
AACTACTTACCTGGCTCAGACCCTTCACAAATAGAAAGAATATTTTCTGA
TGATGCTCATGGATATAGATCTAAGAAGAATAATCCTTCTAGCTATCATC
GGCTAATGGAGTCAGAAATGGCCCCCCGGGATTCTTCTCTTTCACCTCCC
ACTTCTGTTGGAAACCCTT

Query= MSMg01no411_e21.g1 MSMg01no411_e21.g1 CHROMAT_FILE:
MSMg01no411_e21.g1 PHD_FILE: MSMg01no411_e21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:28:18 2005
         (521 letters)



>mm_chr1_186012410_186013331
          Length = 922

 Score =  905 bits (468), Expect = 0.0
 Identities = 505/522 (96%), Gaps = 9/522 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgatggctgctcatgaggacttgggagtggccatttaggtgacaccttccatttgattt 60
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 209 atgatggctgctcatgaggacttgggagtggtcatttaggtgacaccttccatttgattt 268

                                                                       
Query: 61  gggatttctcagtttccccccccccccccggggataatcaaattgattcactctccacaa 120
           |||||||||||||||        |||||||||||||||||||||||||||||||||||||
Sbjct: 269 gggatttctcagttt--------ccccccggggataatcaaattgattcactctccacaa 320

                                                                       
Query: 121 ggtaatagttttaacctcttgatttctgatgttactaatttacagagcaatattcatttg 180
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggcaatagttttaacctcttgatttctgatgttactaatttacagagcaatattcatttg 380

                                                                       
Query: 181 ctttcagaaagtattaaagtggctacaacaaaagagagctataacaaaggcagttt-aaa 239
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 381 ctttcagaaagtattaaagtggctacaacaaaagagagctataacaaaggcagtttaaaa 440

                                                                       
Query: 240 aaaagacaggttagctaagtctttccgtaggaaatatgtcaaacacattaaccacctaga 299
           ||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaagacaggaaagctaagtcttttcgtaggaaatatgtcaaacacattaaccacctaga 500

                                                                       
Query: 300 ttaatattgtcagtggaataaactaataactttgactcagacttcaaacagccagggcag 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttaatattgtcagtggaataaactaataactttgactcagacttcaaacagccagggcag 560

                                                                       
Query: 360 caagggaaatcatgattatataagcctaattacttgataaaaagaaatgtaactttattc 419
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cgagggaaatcatgattatataagcctaattacttgataaaaagaaatgtaactttattc 620

                                                                       
Query: 420 caggcagtaattttcatggagttgaaacaagaagaaagggcatagggtggaggggaggtc 479
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 caggcagtaattttcatggggttgaaacaagaagaaagggcatagggtggaggggaggtc 680

                                                     
Query: 480 agagcacccagctggggaggccctgcttccttattatccagc 521
           |||||||||||||||||||||| |||||||||||||||||||
Sbjct: 681 agagcacccagctggggaggccatgcttccttattatccagc 722


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 521
Length of database: 922
Length adjustment: 10
Effective length of query: 511
Effective length of database: 912
Effective search space:   466032
Effective search space used:   466032
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)