Query= MSMg01no411_h16.b1 MSMg01no411_h16.b1 CHROMAT_FILE:
MSMg01no411_h16.b1 PHD_FILE: MSMg01no411_h16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:28:32 2005
(633 letters)
>mm_chr1_151720236_151721268
Length = 1033
Score = 1065 bits (551), Expect = 0.0
Identities = 610/631 (96%), Gaps = 4/631 (0%)
Strand = Plus / Plus
Query: 5 gaattctgagttctcaatggtatgaacctaagtcaaacagcctagaggagattaaggcag 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgagttcttaatggtatgaacctaagtcaaacagcctagaggagattaaggcag 264
Query: 65 tcctgccagatgactcctgttggccaccagatatttggccacttcaagtgataccaaaaa 124
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 265 tcctgccagatgactcctgttggccaccagatatttggccacttcacgtgataccaaaaa 324
Query: 125 atca--ttcaccataagcctttaatttactaagcagatacggatcattctgttactagcc 182
| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 a--aatttcaccataagcctttaatttactaagcagatacggatcattctgttactagcc 382
Query: 183 tctctgctgctatcccaaaactctagtactgtagttatcaaatggagagattctttcctt 242
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 383 tctctgctgctatcccaaaactctattactgtagttatcaaatggagagattctttcctt 442
Query: 243 atctgtctccattaataaattctgaccgtcttctgggaaaattatttttaccattttccg 302
|| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 443 atttgtctccattaataaattctgaccgtcttctgggaaaattattattaccattttccg 502
Query: 303 tctcagtgggtaatctgacatatgcaacagcttactgctccaacagaataaagtgcaatg 362
|||||||||||||||||||||||||||||||||| |||||| |||||| |||||||||||
Sbjct: 503 tctcagtgggtaatctgacatatgcaacagcttattgctccgacagaacaaagtgcaatg 562
Query: 363 gaagtcagaataccattccacacaagcaaatccataaaatagtgtaggttttcatctctg 422
|||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 563 gaagacagaataccattccacacaagcaaatccataaaatagtacaggttttcatctctg 622
Query: 423 cccaccatcgtggcttatcttctcttcaggaaggcaagccaaacttattgagacatgctg 482
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 623 cccaccatcgtggcttatcttctcttcaggaaggcaagccaaacttactgagacatgctg 682
Query: 483 ggctttaggcactgtttgggttaaatactcctagtaactcttgccttaaagagtcacgtg 542
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 ggctttaggcactatttgggttaaatactcctagtaactcttgccttaaagagtcacgtg 742
Query: 543 acctacaaatattctggcataaaaaatgaggaaagaaagagttaattagtcagtaagatt 602
|||| |||||||||||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 743 acctgcaaatattctggcataaaaaatgattaaagaaagaattaattagtcagtaagatt 802
Query: 603 cccatataatcaatcaatcaaagagaattag 633
|||||||||||||||||||||||||||||||
Sbjct: 803 cccatataatcaatcaatcaaagagaattag 833
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1033
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1023
Effective search space: 637329
Effective search space used: 637329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no411_h16.g1 MSMg01no411_h16.g1 CHROMAT_FILE:
MSMg01no411_h16.g1 PHD_FILE: MSMg01no411_h16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:28:32 2005
(574 letters)
>mm_chr1_151896971_151897945
Length = 975
Score = 663 bits (343), Expect = 0.0
Identities = 361/367 (98%), Gaps = 1/367 (0%)
Strand = Plus / Minus
Query: 206 tagagagatggatgactcagtgggttagagtgtttgtttctcttccagggaccccaattt 265
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 975 tagagagatgggtgactcagtgggttagagtgtttgtttctcttccagggaccccaattt 916
Query: 266 catgccccaaccctacattccagtgctcacaaacatctacaacctcagctttatcagaat 325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 915 catgccccaaccctacattccagtgctcacaaacatctacaacctcagctttatcagaat 856
Query: 326 ctgaagccctcttttagcctctgagggcacctgaacccatgtgacagacagatgggcaga 385
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 855 ctgaagccctcttctagcctctgagggcacctgaacccatgtgacagacagatgggcaga 796
Query: 386 cagatagacacacgcgaaataaatcttaaaaaacaaagaaccccacaaaacatctgtcag 445
|||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 795 cagatagacacacgtgaaataaatcttaaaaaacaaaaaaccccacaaaacatctgtcag 736
Query: 446 atattcttcctaattaatattaggtagtagatgcaaaagaactagaaataaattttttt- 504
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 735 atattcttcctaattaatattaggtagtagatgcaaaagaactagaaataattttttttt 676
Query: 505 acagcccttactggctatttttaccactatagccacaaagatacaatggtaacaaataaa 564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 acagcccttactggctatttttaccactatagccacaaagatacaatggtaacaaataaa 616
Query: 565 tagagac 571
|||||||
Sbjct: 615 tagagac 609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 574
Length of database: 975
Length adjustment: 10
Effective length of query: 564
Effective length of database: 965
Effective search space: 544260
Effective search space used: 544260
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
