Query= MSMg01no412_e11.b1 MSMg01no412_e11.b1 CHROMAT_FILE:
MSMg01no412_e11.b1 PHD_FILE: MSMg01no412_e11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:29:35 2005
(242 letters)
>mm_chr1_114295702_114296345
Length = 644
Score = 197 bits (102), Expect = 4e-55
Identities = 200/236 (84%), Gaps = 17/236 (7%)
Strand = Plus / Minus
Query: 14 aaaacaaaacaaaaca---aaacaaaacaaaa-caaaacaaaa-caaagttaggtgatgt 68
||||| |||| ||||| |||| |||||||| ||| ||||| || |||| |||| |
Sbjct: 485 aaaac-aaac-aaacaagcaaac-aaacaaaaccaacccaaaatca---ttagctgatat 432
Query: 69 tatatggtgatgagtatattagcttatttaagatttaatgtgtaagtgattaaagatcaa 128
|||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 431 tatatggtgatgagtatattagcttatttaagatttaatgcctaagtgattaaagaaca- 373
Query: 129 g-tgttatacaattaaaatttcatgaaaaaatgtccaatacatgatcttatcatcctttt 187
| ||||||| |||||||||| ||||||||||| |||| |||||| ||||| || | ||||
Sbjct: 372 gatgttatataattaaaattccatgaaaaaatttccattacatgttcttaacaacttttt 313
Query: 188 gtacttagagaca--atttaaattt-ttttcttacaggaaaaacagaggctcttac 240
|||||||||| | |||||| ||| |||||| ||||||||||||| |||||||||
Sbjct: 312 atacttagagaaacgatttaa-tttcttttctcacaggaaaaacagtggctcttac 258
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 644
Length adjustment: 9
Effective length of query: 233
Effective length of database: 635
Effective search space: 147955
Effective search space used: 147955
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no412_e11.g1 MSMg01no412_e11.g1 CHROMAT_FILE:
MSMg01no412_e11.g1 PHD_FILE: MSMg01no412_e11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:29:35 2005
(244 letters)
>mm_chr13_67089279_67089922
Length = 644
Score = 472 bits (244), Expect = e-138
Identities = 244/244 (100%)
Strand = Plus / Minus
Query: 1 aggacttctaacctacaacctccccacaaccccccaaaggacattgaccttacagaaagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aggacttctaacctacaacctccccacaaccccccaaaggacattgaccttacagaaagt 385
Query: 61 caaaaacagatgtttaattacagaacaggatcaagctggtgagatgatgagagagtctac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 caaaaacagatgtttaattacagaacaggatcaagctggtgagatgatgagagagtctac 325
Query: 121 agaacagaagagctgctttctcctggaagggagcgcgaactagagtcaaaaggcaatgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 agaacagaagagctgctttctcctggaagggagcgcgaactagagtcaaaaggcaatgct 265
Query: 181 acagaacaaaaaagacttgatggccacgacagctacttgggatgagtgcacagatgttgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 acagaacaaaaaagacttgatggccacgacagctacttgggatgagtgcacagatgttgt 205
Query: 241 aaaa 244
||||
Sbjct: 204 aaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
