Query= MSMg01no412_i18.b1 MSMg01no412_i18.b1 CHROMAT_FILE:
MSMg01no412_i18.b1 PHD_FILE: MSMg01no412_i18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:29:57 2005
(544 letters)
>mm_chr1_6076725_6077668
Length = 944
Score = 729 bits (377), Expect = 0.0
Identities = 404/413 (97%), Gaps = 1/413 (0%)
Strand = Plus / Minus
Query: 132 tcctataaagccagcactaccatggtatcagaactaaataaggaaatagcaacaaccaaa 191
|||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |
Sbjct: 944 tcctataaagccagcactaccatggtatcagaaccaaataagg-aatagcaacaaccaga 886
Query: 192 gaactacagactgatttctataaaaatctagacacaaaaattatcaacaacattctcaca 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 885 gaactacagactgatttctataaaaatctagacacaaaaattatcaacaacattctcaca 826
Query: 252 aattatgtcagagaacacattaaggtcattactattgtcaatttggtttcatcagaggta 311
|| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 825 aaacaagtcagagaacacattaaggtcattactattgtcaatttggtttcatcagaggta 766
Query: 312 caaaaaggtaattcaatgcacataggaagtaaacatgagacgttgctacaaatcgtaaca 371
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 765 caaaaaggtaattcaatgcacataggaagtaaacatgaaacgttgctacaaatcgtaaca 706
Query: 372 tcaagtttggtgatggaacagacataaattatcctccagaaacgagctagagaaaaacca 431
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 tcaagtttggggatggaacagacataaattatcctccagaaacgagctagagaaaaacca 646
Query: 432 tggggccatgatcaagccttgggatgaggagaattatagacattatgaaaacattataag 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 tggggccatgatcaagccttgggatgaggagaattatagacattatgaaaacattataag 586
Query: 492 agacagcctacgattagataaatggctcagtgatgacaaatacttgttactct 544
|||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 585 agacagcctacgattagagaaatggctcagtgatgacaaatacttgttactct 533
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 544
Length of database: 944
Length adjustment: 10
Effective length of query: 534
Effective length of database: 934
Effective search space: 498756
Effective search space used: 498756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no412_i18.g1 MSMg01no412_i18.g1 CHROMAT_FILE:
MSMg01no412_i18.g1 PHD_FILE: MSMg01no412_i18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:29:57 2005
(244 letters)
>mm_chr1_5857450_5858093
Length = 644
Score = 449 bits (232), Expect = e-131
Identities = 241/244 (98%)
Strand = Plus / Plus
Query: 1 catgatccttataagtaaagacaggaaagaagtggagaatagtggaaaatgcagactaca 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 201 catgatccttataagtaaagacaggaaagaagtggagagtagtggaaaatgcagactaca 260
Query: 61 ttgatgctcaacttgggaacgcagctgagaaacaaggtagaacacagattcagtcagtat 120
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgatgctcaacttgggaacacagctgagaaacaaggtagaacacagattcagtcagtat 320
Query: 121 gctctataccttcctgtctgttacttagttctgtccccagaaagtccagcagagggcaca 180
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 321 gctctataccttcctgtctgttacttagttctgtccccagcaagtccagcagagggcaca 380
Query: 181 tggcaaagtgacaggaagtgagtatggaaagtttgtcaggatggatgtggtcattattta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tggcaaagtgacaggaagtgagtatggaaagtttgtcaggatggatgtggtcattattta 440
Query: 241 tatt 244
||||
Sbjct: 441 tatt 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
