GGTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCACCCCNTTTAACCATTTGTCTTCAAGGAGGGAAAGGAGTAATGG
TGGGAGTGAGTGAAATATAATTAATACATCTATTTATTAAAATGTCTCAG
TCAAACATATCAGCTTATATGCTAAAAATTTATGTTGCAATGACATGAAG
AAAACAATTGAATGTGGTTTATACTTCCTGCTCACCAGTGTGCTGGAATG
CACATGTCCCCTCAAGCCATAACACAGAGTTCTCTCAGAGCACACATGTA
AGTTTCTGGTTTTGCCTATATTTTTTTCTTCCTCCATTCTCTGCTTATGG
AATCTCAATGTTTTTACTCTTGTTTCTGAGTAAGTCTGTGGAACCCCTTT
CTGAGGGGACCAAAGCTGCCATTACTCTTTTTCCCTTGTTCTCATGGGTA
GAGGCATCTGCCATAATCATCTGATGTGCTATATTAAGTAATTTCTAACC
ATTTTGTCACAACTCCAAAATCATTTTAAAAGCCCCACTAGTGCCGGTCA
TGGCGGCGCACGCCTTTATTCCCAGCACTCGGCAGGCAGATGTACGCATA
TTTCTGATTTCGAGGGCAGCCTGGTCTACTTTGTGATTGTCACGACCCCC
CGCGTTTATTCTTCTTATATCCCCTGTCCCGAAAAACCTAAAACACACAA
ACACAGCCCCAACTAGCGTATTTGTCACTCTTCTTAAACCCTGACAATAT
TN

NNNCCAATGATANTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXTCTTCAAGTTTCATATCCCCAA
TAGTGTGTGAGTGACAAGTAAGGTCGCCCCATTGATTCTTGGTTTCTGAC
ACATCCTGGAGCATGTACTTTTGGGTCTTGGTTACCTTACTCAGGATGAC
ATTCTCATGTTCCATCCATTTGCCTGCAAAATTCATCAATCCTTTGTTTT
TAATAGCTGATTAGTATTCAGTTGTGTAGATGTATCATGTTTTCTTTATT
CATTCTTCAGTTTGAGTGATATCTAGGTTGTTTCTAGTTTCTGGCTATTA
CAAAGAAAGTTGCTATGAACATAGTTGAACAAATGTCTTTGTGGGTTTGT
GGGGTATCTTTTGGTCATATGCCCAGCCAAGGTATTGCCTGGTCATGAGA
TTCCCAGTTTTCTGTGAAAGTACCAAATTGATTTCCAGAATGACTGTACA
AGTTTGTACTTCCAAAGAATGGAGGAGTGCTTCCTTTGATCCACATACAG
CATGTGTCTGTTTTTTGAACGTCTGATCACTACTTTTCTTGAAAATATAA
AATGGGACCCTCCCATGTGGGTTTCGACCCTCTTTCCCTGCTTATATCAC
ACGTTTTATTTTCTTCTTTTCTGGCCCCCCCCAGCTTTTACACTCGTGGA
TCGGACTTCCTGTATTGCTCTCTCAATCCTCCACATCTCAATTTATATTT
ATCCCCATTTC

Query= MSMg01no412_k08.b1 MSMg01no412_k08.b1 CHROMAT_FILE:
MSMg01no412_k08.b1 PHD_FILE: MSMg01no412_k08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:30:05 2005
         (468 letters)



>mm_chr1_3374465_3375331
          Length = 867

 Score =  830 bits (429), Expect = 0.0
 Identities = 458/471 (97%), Gaps = 7/471 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   cttcaaggagggaaaggagtaatggtgggagtgagtgaaatataattaatacatctattt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttcaaggagggaaaggagtaatggtgggagtgagtgaaatataattaatacatctattt 260

                                                                       
Query: 61  attaaaatgtctcagtcaaacatatcagcttatatgctaaaaatttatgttgcaatgaca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attaaaatgtctcagtcaaacatatcagcttatatgctaaaaatttatgttgcaatgaca 320

                                                                       
Query: 121 tgaagaaaacaattgaatgtggtttatacttcctgctcaccagtgtgctggaatgcacat 180
           ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||
Sbjct: 321 tgaagaaaacaattgaatgtggtttatgcttcctgctcaccagtttgctggaatgcacat 380

                                                                       
Query: 181 gtcccctcaagccataacacagagttctctcagagcacacatgtaagtttctggttttgc 240
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 381 gtcccctcaagccataacacagagttctctcagagcacacatgtaagtttctggttttac 440

                                                                       
Query: 241 ctata---tttttttcttcctccattctctgcttatggaatctcaatgtttttactcttg 297
           || ||   | |    |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctgtagggtgt----cttcctccattctctgcttatggaatctcaatgtttttactcttg 496

                                                                       
Query: 298 tttctgagtaagtctgtggaacccctttctgaggggaccaaagctgccattactcttttt 357
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 497 tttctgagtaagtctgtggaacccctttctgaggggaccaaagctgccattattcttttt 556

                                                                       
Query: 358 cccttgttctcatgggtagaggcatctgccataatcatctgatgtgctatattaagtaat 417
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 cccttgttctcatgggtagaggcatctgccataatcatctgatgtgctatattaagtaat 616

                                                              
Query: 418 ttctaaccattttgtcacaactccaaaatcattttaaaagccccactagtg 468
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 ttctaaccattttgtcacaactccaaaatcattttaaaagccccactagtg 667


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 468
Length of database: 867
Length adjustment: 10
Effective length of query: 458
Effective length of database: 857
Effective search space:   392506
Effective search space used:   392506
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)