Query= MSMg01no412_p02.b1 MSMg01no412_p02.b1 CHROMAT_FILE:
MSMg01no412_p02.b1 PHD_FILE: MSMg01no412_p02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:30:28 2005
(561 letters)
>mm_chr1_153485057_153486017
Length = 961
Score = 920 bits (476), Expect = 0.0
Identities = 506/516 (98%), Gaps = 1/516 (0%)
Strand = Plus / Minus
Query: 47 gtatgttttcccagtgtgtacgtatatgcaccataagtgtgtgtagtgtctctaaagaac 106
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 961 gtatgttttcccagtgtgtatgtatatgcaccataagtgtgtgtagtgtctctaaagaac 902
Query: 107 agaagaggacatcagaccattgagaacttgagatctggagttctaggtgcttgtggggca 166
|||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||
Sbjct: 901 agaagaggacatcagaccattgagaacttgagatctggagttttaggtgcttgtgaggca 842
Query: 167 ccatgtggtcctaggacccaagttcaagtcctctgtaagagcaacgggtgcttttaattt 226
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 841 ccatgtggtcctaggacccaagttcaagtcctctgtaaaagcaacgggtgcttttaattt 782
Query: 227 ctcgg-catctctctagctacagagcgtgcatcccaacgtgctctctgaaccctgagact 285
||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||
Sbjct: 781 ctcggccatctctctagctccagaacgtgcatcccaacgtgctctctgaaccctgagact 722
Query: 286 attttgtggaattcccatgctgctgaattctctggctaactcactcagactctcagcagc 345
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 721 attttgtggaattcccatgctgctgaattctctggctaactcattcagactctcagcagc 662
Query: 346 agctggtccactcatcactcattcctggcttttctgactcatttctcctactcctccggg 405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 agctggtccactcatcactcattcctggcttttctgactcatttctcctactcctccggg 602
Query: 406 agtttcttcttagtgtttttgcctggactctcacctcatcatgatctgcaaatgctgctg 465
||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 601 agtttcttcttagtgtttttgcctgcactctctcctcatcatgatctgcaaatgctgctg 542
Query: 466 aggctggtgccttttcactctgtctcagtcctcctcccaccatacctcactgctgctctc 525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aggctggtgccttttcactctgtctcagtcctcctcccaccatacctcactgctgctctc 482
Query: 526 catgatgagctaacaatcccagaccccatctgtcta 561
||||||||||||||||||||||||||||||||||||
Sbjct: 481 catgatgagctaacaatcccagaccccatctgtcta 446
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 561
Length of database: 961
Length adjustment: 10
Effective length of query: 551
Effective length of database: 951
Effective search space: 524001
Effective search space used: 524001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no412_p02.g1 MSMg01no412_p02.g1 CHROMAT_FILE:
MSMg01no412_p02.g1 PHD_FILE: MSMg01no412_p02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:30:29 2005
(152 letters)
>mm_chr1_153348669_153349220
Length = 552
Score = 294 bits (152), Expect = 2e-84
Identities = 152/152 (100%)
Strand = Plus / Plus
Query: 1 cttttctgtggcttaaaattttcttacttattgtattattcggggttttctatagaaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttttctgtggcttaaaattttcttacttattgtattattcggggttttctatagaaaca 260
Query: 61 actaatagaatgcatatatattaaatatattcagcatatagagaggggggatattaagta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 actaatagaatgcatatatattaaatatattcagcatatagagaggggggatattaagta 320
Query: 121 tatgcaatatagagagaggtggggtgggtatt 152
||||||||||||||||||||||||||||||||
Sbjct: 321 tatgcaatatagagagaggtggggtgggtatt 352
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 152
Length of database: 552
Length adjustment: 8
Effective length of query: 144
Effective length of database: 544
Effective search space: 78336
Effective search space used: 78336
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
