XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCACATCCCT
TTACCCCAGATCTGTGGGGAAGACCTGCTCTACCTGGTTCCTCTCTCCCT
CTCACCTCTCCACAGTTGTTCTTTCTCCTTAAAAAGTTACTTTGCAGCCA
GGTGGTGGTGACATACACATTTCATCCCAGCACTTGGCAGAGGCAGAGGC
AGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAG
AGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAG
GCAGAGGCAGAGGTTTATGAGGCAGAGGCAGAGGAGGCAGAGGCAGATCT
CTGAATTCAAGACCAGTCAGGTCTACAGAGTTCCAGGACAACCAGGGCTA
CACAGAGAACCCGTGTCTTGAAAACACAGAGCAAAACAATCACCCACCCA
CCTTACTTTAATGTACATATGGGGGCTTTTGCTGGTGGATATGATGTGGC
TCCTCCAGAGGCCAGGAGAGGGAGCCAATCCCTTGAACTGGAGCTAGACA
GGTACCTGTGAGCTACCATGTGGATGCTGTGGATCAAATCATGATCCTCT
GCGGGGTTAGTCGGTGCTCTCCATGCAAAGCCACCTTCTCCAGGGTTTTT
GCTTTTGTTCCCTCCTTAACTCCCTGTCCCTAAGTACTCTGGCTTTCTTG
TTCCATTCTTGGCCCTGAATTGCATATCATGTTTGCTTCCCTTCTTCTTC
CCCCCCCT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXAATAAAAACAGTACAATGTGTGATAATTTCTGAGAATGT
GAAATACAGAGATTTTGTCAAAGGGGATAATTCTCAAACACAACCAGCAT
AAAACACTTGGAACTATTATTTTACTTGAATAACAACTTCAGCAATTTTG
AGGCAGAAAAGCAGCTAACATAGATAAATCATTACTACTATCAATAGTCA
ATACATAGGAAACAAGTGTTCATGGGCAGATGAATTACTAAAATATGGCA
CACAATATAATATTGTTCATTGTTAGAAGGGAATTCTGACACCTGCTACA
GTATGGATCAACCTTGAAGGTAATATGTTAAGTAAGATAAGCCATTCACA
GAAATATAAACATTATGTGTCTTCAATTATATGAGGTACTTTCAATAGCA
GAAATTATAGTGACTAAGGAAAGTAGTTGCTAGGACCTGGAGATGGGAGC
ACCGAAGCAGCTACTGGTTAGTAGTTCTTCATTTCAGTTTTATGGATGAA
TAGTGGTGCTGGCTGTACAGTACTGTGTATATATACTAGACTTAAATGCT
TAAAATGAAAAATGTATGCCTGTGGGTGTGGGAAATCCCAAAGGTTACCA
CAGTGGGTAGGTTTGAAAACTCCCCCCCCCCGGGGTGGAATATGAAAAAA
CTGGCCTACCTATCCCCGGGGGGAGTTGGGTTCCAAGGAACGAAAAACCA
CCTTCCCCTTTTGTTTGGG

Query= MSMg01no413_m21.g1 MSMg01no413_m21.g1 CHROMAT_FILE:
MSMg01no413_m21.g1 PHD_FILE: MSMg01no413_m21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:31:36 2005
         (459 letters)



>mm_chr1_178731925_178732783
          Length = 859

 Score =  837 bits (433), Expect = 0.0
 Identities = 451/459 (98%), Gaps = 4/459 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   aataaaaacagtacaatgtgtgataatttctgagaatgtgaaatacagagattttgtcaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aataaaaacagtacaatgtgtgataatttctgagaatgtgaaatacagagattttgtcaa 260

                                                                       
Query: 61  aggggataattctcaaacacaaccagcataaaacacttggaactattattttacttgaat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggggataattctcaaacacaaccagcataaaacacttggaactattattttacttgaat 320

                                                                       
Query: 121 aacaacttcagcaattttgaggcagaaaagcagctaacatagataaatcattactactat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 321 aacaacttcagcaattttgaggcagaaaagcagctaacatagataaatcattactactac 380

                                                                       
Query: 181 caatagtcaatacataggaaacaagtgttcatgggcagatgaattactaaaatatggcac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 381 caatagtcaatacataggaaacaagtgttcatgggcagatgaattactaaaatatggtac 440

                                                                       
Query: 241 acaatataatattgttcattgttagaagggaattctgacacctgctacagtatggatcaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acaatataatattgttcattgttagaagggaattctgacacctgctacagtatggatcaa 500

                                                                       
Query: 301 ccttgaaggtaatatgttaagtaagataagccattcacagaaatataaacattatgtgtc 360
           |||||||||||||||||||||    |||||||||||||||||||||||||||||||||||
Sbjct: 501 ccttgaaggtaatatgttaag----ataagccattcacagaaatataaacattatgtgtc 556

                                                                       
Query: 361 ttcaattatatgaggtactttcaatagcagaaattatagtgactaaggaaagtagttgct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 557 ttcaattatatgaggtactttcaatagcagaaattatagtgactaaggaaagtagatgct 616

                                                  
Query: 421 aggacctggagatgggagcaccgaagcagctactggtta 459
           ||||||||||||||||||||| |||||||||||||||||
Sbjct: 617 aggacctggagatgggagcactgaagcagctactggtta 655


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 459
Length of database: 859
Length adjustment: 10
Effective length of query: 449
Effective length of database: 849
Effective search space:   381201
Effective search space used:   381201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)