Query= MSMg01no414_d06.b1 MSMg01no414_d06.b1 CHROMAT_FILE:
MSMg01no414_d06.b1 PHD_FILE: MSMg01no414_d06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:32:09 2005
(472 letters)
>mm_chr1_195613189_195614060
Length = 872
Score = 712 bits (368), Expect = 0.0
Identities = 409/428 (95%), Gaps = 11/428 (2%)
Strand = Plus / Minus
Query: 50 gaccaagaagctagtttagcatcagtggatatggaggcatataggaaaaagcaaaagcaa 109
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 872 gaccaagaagctagtttagcatcagtggatatggaggcatataggaaaaagc---ag--- 819
Query: 110 agagacccctttatttcgggttctctgttcttatgacaggcctttcctccttagcaaatt 169
|||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 818 agagacccctttattttgggttctctgttcttatgacaggcctttccttcttagcaaatt 759
Query: 170 ctcaacagaaaaggccagaggctgtttcctagttgattcaaaacccagtcaaatttgcag 229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758 ctcaacagaaaaggccagaggctgtttcctagttgattcaaaacccagtcaaatttgcag 699
Query: 230 tcaggatcaac-----caggataccaggaggatttcttccaatccagtagctacagcagc 284
||||||||||| |||||| || ||||||||||||||| ||||||||||||||||||
Sbjct: 698 tcaggatcaaccaccacaggatgccgggaggatttcttccagtccagtagctacagcagc 639
Query: 285 agcaactctttccttttgttccattggagaaggaaaagccaaagaaaatcccctactcaa 344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 agcaactctttccttttgttccattggagaaggaaaagccaaagaaaatcccctactcaa 579
Query: 345 gctgacagaatggggcaagtggggaagacatgactcacactctcctgagagcaggacagg 404
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 578 gctgacagaatggggcaagtgggggagacatgactcacactctcctgagagcaggacagg 519
Query: 405 aagcagcataagaggctatatgccctggtcttctgtgcagcaataacgtggcagaagtca 464
||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 518 aagcagcataagaggctatatgccctggtcttctgtgcagcaataacatggcaaaagtca 459
Query: 465 ggtatggt 472
||||||||
Sbjct: 458 ggtatggt 451
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 472
Length of database: 872
Length adjustment: 10
Effective length of query: 462
Effective length of database: 862
Effective search space: 398244
Effective search space used: 398244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no414_d06.g1 MSMg01no414_d06.g1 CHROMAT_FILE:
MSMg01no414_d06.g1 PHD_FILE: MSMg01no414_d06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:32:09 2005
(393 letters)
>mm_chr1_195461387_195462179
Length = 793
Score = 609 bits (315), Expect = e-179
Identities = 362/393 (92%), Gaps = 24/393 (6%)
Strand = Plus / Plus
Query: 1 atcctggagatcaaatattcccagaaccattgtatggaatctctaaaacaggcatgaaca 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atcctggagctcaaatattcccagaaccattgtatggaatctctaaaacaggcatgaaca 260
Query: 61 cacacattcagagtgctgattctgatcttaatggatggtaatctagccttagaggcacct 120
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cacacattcagagcactgattctgatcttaatggatggtaatctagccttagaggcacct 320
Query: 121 gtctacttatccttgcagggcctgccctcccctgtttgccaggcccacctcaataccatt 180
||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||
Sbjct: 321 gtctacttatccttgcagggcctgccctcccttgtttgtcaggcccacctcaataccatt 380
Query: 181 tctatctatctatctatctatctatctatctatctatctatctatctatctatctatcta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctatctatctatctatctatctatctatctatctatctatctatctatctatctatcta 440
Query: 241 tctatctatctatctatctatctatctatctatctagactatggtggcctattaactagc 300
|||||||||||| ||||||||||| ||||||||||||
Sbjct: 441 tctatctatcta------------------------gactatggtggtctattaactagc 476
Query: 301 cttttagtctacactggtcctgcactggaggtggtagaattcttgtatcacaccaaggcc 360
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 477 cttttagtctacactggtcctgcactggaggtggtagaattcttgtatcataccaaggcc 536
Query: 361 agtgtcagctccccattctgaacttggagctgg 393
|||||||||||||||||||||||||||||||||
Sbjct: 537 agtgtcagctccccattctgaacttggagctgg 569
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 78
Number of extensions: 29
Number of successful extensions: 29
Number of sequences better than 10.0: 1
Number of HSP's gapped: 24
Number of HSP's successfully gapped: 1
Length of query: 393
Length of database: 793
Length adjustment: 9
Effective length of query: 384
Effective length of database: 784
Effective search space: 301056
Effective search space used: 301056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|