Query= MSMg01no414_m22.b1 MSMg01no414_m22.b1 CHROMAT_FILE:
MSMg01no414_m22.b1 PHD_FILE: MSMg01no414_m22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:32:58 2005
(481 letters)
>mm_chr1_150710457_150711337
Length = 881
Score = 803 bits (415), Expect = 0.0
Identities = 447/465 (96%), Gaps = 13/465 (2%)
Strand = Plus / Minus
Query: 30 cacccacaattatgtgcacaaacatatgaatgtgtgtgcgtgtgttt--------tgtgt 81
||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 881 cacccacaattatgtgcacaaacatatgaatgtgtgtgcgtgtgttttgtgtgtgtgtgt 822
Query: 82 gtgtgtgtatcatagatgtt-----ttttaagttcttatttatttttgaaacatggtctc 136
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 821 gtgtgtgtatcatagatgtttttgattttaagttcttatttatttttgaaacatggtctc 762
Query: 137 tcattgtagatggtatcaaattcagacttctttgcctcacctctaatctgggattaaaaa 196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 tcattgtagatggtatcaaattcagacttctttgcctcacctctaatctgggattaaaaa 702
Query: 197 tatgcaccactctgcctggcgaagtccatggaattttagtagtcctgtgcattgaagtta 256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 tatgcaccactctgcctggcgaagtccatggaattttagtagtcctgtgcattgaagtta 642
Query: 257 atcaatgtggtatttcacctcttttattaaatgttgctaattcaatagaaatcaatagat 316
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 641 atcaatgtggtatttcacctcttttactaaatgttgctaattcaatagaaatcaatagat 582
Query: 317 gcttcagtttagattttatgttaacctagattacagaaatgacaatgaacttatcagtgt 376
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 581 gcttcagtttagattttatgttaacctagattacagaaatgacaatgaatttatcagtgt 522
Query: 377 ccttgggcaagtgtgcttgagtttttaagtcaccagcaacatcagggtggcatgagataa 436
||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||
Sbjct: 521 ccttgggcaagtgtgctggagtttctaagtcaccagcaacatcagggtggcatgagataa 462
Query: 437 gtcctgctatcttatgtcatttgactcctggagtggcaagacaaa 481
|||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 461 gtcctgctatcttatgtcatttgacttctggagtggcaagacaaa 417
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 481
Length of database: 881
Length adjustment: 10
Effective length of query: 471
Effective length of database: 871
Effective search space: 410241
Effective search space used: 410241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no414_m22.g1 MSMg01no414_m22.g1 CHROMAT_FILE:
MSMg01no414_m22.g1 PHD_FILE: MSMg01no414_m22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:32:58 2005
(449 letters)
>mm_chr1_150584509_150585356
Length = 848
Score = 632 bits (327), Expect = 0.0
Identities = 363/375 (96%), Gaps = 1/375 (0%)
Strand = Plus / Plus
Query: 1 tcctaaaccaaggcatcaagccttcacaggaccaagggcgtctcctcccattaatgtcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcctaaaccaaggcatcaagccttcacaggaccaagggcgtctcctcccattaatgtcag 260
Query: 61 acaaggccatcctctgctacatatgcagctggagtcatgaatccttccatgtgtactttt 120
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 261 acaaggccatcctctgctacatatgcagctggagtcatggatccttccatgtgtactttc 320
Query: 121 aggttagtggtttagtgcctagaagctcttgggagtctggttggttgatattgctgttct 180
||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 321 aggttggtggtttagtgcctagaagctcttgggagtctggttggttgatattgttgttct 380
Query: 181 tcctatggtgttataaccccttcaaattgaaacccattcagttgaagggagcagatatac 240
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 381 tcctatggtgttataaccccttcaaattgaaacccattcagttgaatggagcagatatcc 440
Query: 241 acacacctataatatgtattcaattttagtcctccaaaaagagtaaggagagattgcata 300
||||||||| || ||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 441 acacacctagaaaatgtattcaatttaa-tcctccaaaaagagtaaggagagattgcata 499
Query: 301 tttaggttaagtaaaattacaaattaattagagtctaggaatgtagatcatggtcaagag 360
|||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 500 tttaggttaagtaaaattacaaattaattaaagtctaggaatttagatcatggtcaagag 559
Query: 361 ttttgatttaatctt 375
|||||||||||||||
Sbjct: 560 ttttgatttaatctt 574
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 449
Length of database: 848
Length adjustment: 10
Effective length of query: 439
Effective length of database: 838
Effective search space: 367882
Effective search space used: 367882
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
