Query= MSMg01no416_g07.b1 MSMg01no416_g07.b1 CHROMAT_FILE:
MSMg01no416_g07.b1 PHD_FILE: MSMg01no416_g07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:35:00 2005
(448 letters)
>mm_chr1_42185020_42185867
Length = 848
Score = 851 bits (440), Expect = 0.0
Identities = 446/448 (99%)
Strand = Plus / Plus
Query: 1 gttctaaccacctgtatacttacttaacctcttggtatttcattttgtcccctactaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gttctaaccacctgtatacttacttaacctcttggtatttcattttgtcccctactaaat 260
Query: 61 ttggctagtcattgaacttattttatgaagggtttcacaagccaaagaaattagtattca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttggctagtcattgaacttattttatgaagggtttcacaagccaaagaaattagtattca 320
Query: 121 tgaagtgcttagattaatgccatatagaaatattatgagccataaataaatgcttgtaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgaagtgcttagattaatgccatatagaaatattatgagccataaataaatgcttgtaat 380
Query: 181 tattgaataaccatgtggtttctttctggtgaattggcttctgtgtgtggcttactcttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tattgaataaccatgtggtttctttctggtgaattggcttctgtgtgtggcttactcttt 440
Query: 241 gctagtgcgtaagttattagtttgttggtttgcatcgttaacattttattcttcaaaagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gctagtgcgtaagttattagtttgttggtttgcatcgttaacattttattcttcaaaagt 500
Query: 301 agtctaccttacaatgttatagccagtccttttctacctcatcttgtgtgctactagatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agtctaccttacaatgttatagccagtccttttctacctcatcttgtgtgctactagatc 560
Query: 361 aaaccagtgagactagtcatctcctttgctcttaagtccttcagactaaaataacaccaa 420
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 561 aaaccagtgagactagtcatctcctttgctcttcagtccttcagactaaaataacaccaa 620
Query: 421 gttgccagcatgtacatgttcttcaagc 448
||||||||||||||||||||||| ||||
Sbjct: 621 gttgccagcatgtacatgttctttaagc 648
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 448
Length of database: 848
Length adjustment: 10
Effective length of query: 438
Effective length of database: 838
Effective search space: 367044
Effective search space used: 367044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no416_g07.g1 MSMg01no416_g07.g1 CHROMAT_FILE:
MSMg01no416_g07.g1 PHD_FILE: MSMg01no416_g07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:35:00 2005
(378 letters)
>mm_chr1_42332200_42332977
Length = 778
Score = 648 bits (335), Expect = 0.0
Identities = 363/377 (96%), Gaps = 10/377 (2%)
Strand = Plus / Minus
Query: 8 atatatatatatatatatacatacatatatatacacacacatatatacacatacatac-- 65
||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 722 atatatatacatatatatacatacatatat----acacacatatatacacatacatacat 667
Query: 66 atatatatatacacacacatttatac----acatacacacacatatatatatgtatgtgt 121
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 666 atatatatatacacacacatttatacacatacatacacacacatatatatatgtatgtgt 607
Query: 122 gtgtgtgcgcatatatatatatatatatggagtgtactcaataataggttaatctcacta 181
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 gtgtgtgcgcatatgtatatatatatatggagtgtactcaataataggttaatctcacta 547
Query: 182 cacccaactatatatctcctttaactttaaggtcttcctccctctctctccctactagta 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 cacccaactatatatctcctttaactttaaggtcttcctccctctctctccctactagta 487
Query: 242 atgatgtctaataaaatagaatgttttaacagacaaaactaaaacaacaattctttctat 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 atgatgtctaataaaatagaatgttttaacagacaaaactaaaacaacaattctttctat 427
Query: 302 gccaaacattgaaaattactaacagaagtaataaggcataaagatggccagagagagtcc 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 gccaaacattgaaaattactaacagaagtaataaggcataaagatggccagagagagtcc 367
Query: 362 agaacggtatgatgaca 378
|||| || |||||||||
Sbjct: 366 agaatgggatgatgaca 350
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 101
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 378
Length of database: 778
Length adjustment: 9
Effective length of query: 369
Effective length of database: 769
Effective search space: 283761
Effective search space used: 283761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
