Query= MSMg01no416_n20.b1 MSMg01no416_n20.b1 CHROMAT_FILE:
MSMg01no416_n20.b1 PHD_FILE: MSMg01no416_n20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:35:35 2005
(333 letters)
>mm_chr1_59697093_59697826
Length = 734
Score = 605 bits (313), Expect = e-177
Identities = 328/333 (98%), Gaps = 1/333 (0%)
Strand = Plus / Plus
Query: 1 gttagttccaaaccagccttggctaaatgagattgtctcaaaaaactggagaaagactgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gttagttccaaaccagccttggctaaatgagattgtctcaaaaaactggagaaagactgg 260
Query: 61 tggtgtgtggcttaatcccagtgctcaaaagccaaaggcaggcagatagatttctgtgag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggtgtgtggcttaatcccagtgctcaaaagccaaaggcaggcagatagatttctgtgag 320
Query: 121 tttgaggcaccctgtttaaattgtgagtttcaggacagcccaggatacatagtgagaccc 180
|||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 321 tttgaggcaccctgtttacattgtgagtttcagaacagcccaggatacatagtgagaccc 380
Query: 181 ccgtctcaaaaaaacttaagagaaacaacaacaaacaaatccaagcaaacaaaaaatagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccgtctcaaaaaaacttaagagaaacaacaacaaacaaatccaagcaaacaaaaaatagg 440
Query: 241 atttgcacagcatgtacaaggtcaagagattgatctagcacagactagaggggaaggaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atttgcacagcatgtacaaggtcaagagattgatctagcacagactagaggggaaggaaa 500
Query: 301 tggaggaggaagaaggg-tagggagaggagagg 332
||| |||||||| |||| |||||||||||||||
Sbjct: 501 tgggggaggaaggaggggtagggagaggagagg 533
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 333
Length of database: 734
Length adjustment: 9
Effective length of query: 324
Effective length of database: 725
Effective search space: 234900
Effective search space used: 234900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no416_n20.g1 MSMg01no416_n20.g1 CHROMAT_FILE:
MSMg01no416_n20.g1 PHD_FILE: MSMg01no416_n20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:35:35 2005
(509 letters)
>mm_chr1_59861492_59862400
Length = 909
Score = 861 bits (445), Expect = 0.0
Identities = 445/445 (100%)
Strand = Plus / Minus
Query: 1 agaaatagccaatttatattctgagatttaggaggcaaaaacattacagtaataactaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 agaaatagccaatttatattctgagatttaggaggcaaaaacattacagtaataactaac 386
Query: 61 agtttactggtgggcagatgaaaactggggaacaaaatgcacaagagctctggtttagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agtttactggtgggcagatgaaaactggggaacaaaatgcacaagagctctggtttagag 326
Query: 121 aatgcaaataaaatgaagctgtcttagtaagacaaaatatagacatgaaaaatgactact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aatgcaaataaaatgaagctgtcttagtaagacaaaatatagacatgaaaaatgactact 266
Query: 181 atcctgaacatctgctgtattcactatgaataatttcaagtgaatttccctgaaagacag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atcctgaacatctgctgtattcactatgaataatttcaagtgaatttccctgaaagacag 206
Query: 241 caaccctttgaagcccaggctagcctggaacatgctgtatagcccaggctgattgatctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 caaccctttgaagcccaggctagcctggaacatgctgtatagcccaggctgattgatctt 146
Query: 301 ggcatcacattcctgctctaaccctgaaggcagggagtgcaggcacaagacacaacaccc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 ggcatcacattcctgctctaaccctgaaggcagggagtgcaggcacaagacacaacaccc 86
Query: 361 gggttatccttcttttttttttttttaatcttcactgccattctatgtctaaacaatcca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 gggttatccttcttttttttttttttaatcttcactgccattctatgtctaaacaatcca 26
Query: 421 aaagtctcacaacacttatcctcta 445
|||||||||||||||||||||||||
Sbjct: 25 aaagtctcacaacacttatcctcta 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 509
Length of database: 909
Length adjustment: 10
Effective length of query: 499
Effective length of database: 899
Effective search space: 448601
Effective search space used: 448601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
