NTTCAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCAGTATCTCTGTGGAAGGTAAAATGTTGTAGAACCACATATTAC
TATTACTAATGTTAGCTGGCAATCACTTTCCATTTACATTTTATATTTCT
GAGCCAAATTAATGAAAAATGACCTATCCCTCTAATGAATAATTTGTCCC
CAGGCATAAATTGGATGTAGTCATAAACACATTAGCAGTTTCAGGCTCAC
CAATTTTAAAACTCTGATGTTGGAAGGGACCTTAGGGATCAACAAGCACA
GCCCCCTCATTTTCCTATTTATGCTTACAGCACTAATTATTACAATCTGC
GGCCATGGGCAATGGTCGGAAGGCATTAACAGACCCACAGGAGTGCTCCA
CCAACCTGGCCTCTAATTGCCAGTTACAACTCAATCCTGGCATGAGAGGG
AGTACATTTTTACCCCCTTTACTGGGAACAGATATTCTTAGTCCACAGCA
AGGGTTTCCATTCATATTGAAAACTGAGGGGTGCAGGGGCAGGAAACACA
CTGCAAATCCAACTGAGATTTTCTGTGTATGGAGAACATAATCTAGTTTG
AAAATTAATTCAATGTCACAGCCATTCTAATATGAATAACTTGATGCCAG
AATTCAGTGAGTAAAGAGCTTGTCATGCAAGAGTAAGGTCCAGAGTTTGC
ATCTCTAGAAACCGCATAAAAGCTTGGTGTACACAAAGACATGCTGTAAT
CN

NCGAATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXACTGAATCAATTAATCCATACAA
CTTTGAAACCCAGGGCTGTTTTAAGACAGTTTTCCATATGAAGAGACAGG
CACAGTATGTTAAGTGACCTGCCCAAACTCTAAGTGTTTGGTTTGAATAA
GAATGGCATCCTCCCTACATAGGCTCATATATACTTGGATGATTAGATGG
CAGGGAATGGCACTATTTGAGAAGGATTAGGAGGTGTGGGCTTGTTGGAG
TGGGTGCAGCCTTGTTGGAGGAATTATGACACTGGGGCTGGACCCTGAGT
TTTCAAAGCCCATGCCAGGACCAATCCCATCAGCATCACCATCAGCATCA
CCATCGCCAACACCATCACTACCACTTGCAGATCAAAATTAGCTTTCAGC
TAGTACTGCTCTAGTGACATTGGTGCTGCTATGCTTCCACTGTGGATAAT
GGACTAACCTTTGACACTGTAAGCAAGCCTCCAATTAAATTCTTTCTTGA
ATGGGGAGCCTTGATCATGATGTCTCTTCATAGCAATACGACAGTAATAT
AGTGACTAATATAGCTAGAAAGCATCAGACATTGATGCCTACCCTCTGCT
GTACAAGTTCAGGCTTCTTGCTCATTTGTTTGTTTGGCTGCTTGCTCGTT
TCGCCCAAATTGAAAATAGCCCGTGGTACTATTACTTGCCTCGTTTGATA
CN

Query= MSMg01no417_f11.b1 MSMg01no417_f11.b1 CHROMAT_FILE:
MSMg01no417_f11.b1 PHD_FILE: MSMg01no417_f11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:36:12 2005
         (587 letters)



>mm_chr1_76659653_76660639
          Length = 987

 Score = 1120 bits (579), Expect = 0.0
 Identities = 585/587 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tggaaggtaaaatgttgtagaaccacatattactattactaatgttagctggcaatcact 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tggaaggtaaaatgttgtagaaccacatattactattactaatgttagctggcaatcact 260

                                                                       
Query: 61  ttccatttacattttatatttctgagccaaattaatgaaaaatgacctatccctctaatg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttccatttacattttatatttctgagccaaattaatgaaaaatgacctatccctctaatg 320

                                                                       
Query: 121 aataatttgtccccaggcataaattggatgtagtcataaacacattagcagtttcaggct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aataatttgtccccaggcataaattggatgtagtcataaacacattagcagtttcaggct 380

                                                                       
Query: 181 caccaattttaaaactctgatgttggaagggaccttagggatcaacaagcacagccccct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caccaattttaaaactctgatgttggaagggaccttagggatcaacaagcacagccccct 440

                                                                       
Query: 241 cattttcctatttatgcttacagcactaattattacaatctgcggccatgggcaatggtc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cattttcctatttatgcttacagcactaattattacaatctgcggccatgggcaatggtc 500

                                                                       
Query: 301 ggaaggcattaacagacccacaggagtgctccaccaacctggcctctaattgccagttac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggaaggcattaacagacccacaggagtgctccaccaacctggcctctaattgccagttac 560

                                                                       
Query: 361 aactcaatcctggcatgagagggagtacatttttaccccctttactgggaacagatattc 420
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 561 aactcaatcctggcatgagagggagtacatttttaccccctttactgggaacagatatcc 620

                                                                       
Query: 421 ttagtccacagcaagggtttccattcatattgaaaactgaggggtgcaggggcaggaaac 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttagtccacagcaagggtttccattcatattgaaaactgaggggtgcaggggcaggaaac 680

                                                                       
Query: 481 acactgcaaatccaactgagattttctgtgtatggagaacataatctagtttgaaaatta 540
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 681 acactgcaaatccaactgagattttctgtgtatggagaacataatctggtttgaaaatta 740

                                                          
Query: 541 attcaatgtcacagccattctaatatgaataacttgatgccagaatt 587
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 attcaatgtcacagccattctaatatgaataacttgatgccagaatt 787


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 587
Length of database: 987
Length adjustment: 10
Effective length of query: 577
Effective length of database: 977
Effective search space:   563729
Effective search space used:   563729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)