GGGTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTTGCATCTATCTTGCATGTCTTTTTTGAATATTTAGAAATCCA
GCTAGAGAAACAATATACTGTGATTTGTTTTCAGAAGATTTTAGATTATT
GATCCAGTTAAATATTTAACACACTGGTTCAGACTTTTTTTGGATGCTTA
TATGAAATTTTCTACAAGAGCTTTTGATGGAAGTTTGTTTTAATTTTTTT
ATTGTCAAAACTTGGTGACCTCTTTTTCTGATACTACCTATAATGTTTGT
TTTTTATTTTTTATTCTTGACTATTTCTTTAAAGGGATATGTCAGTTTTA
TAAATTTTATCCCAAGGATTAACTTTTGACTCTTCCCTGTGGTGATCTTC
TGCCCTTTATTACCACTCCCTTGCTGCTTGGCTTTTTGTTTCTCGTGTTC
TGCTCTGGATGTGCTTTTTATGTAGACTATCAGGCAGGGGGTTATGGTTG
TACTTGGTTCTTTTTGTCTTAGCTACATCAAATGGTTTTGAATTGTACTT
TATATGGAACTATTTTAAACAGTGGATTAGTTAGATAAAAACATTATTTG
AATATGAAGATTTTCATTTTTTTTCCTATAGTCCTTTGCTACGCTGAAGC
TACATATTGAAACACTGTGACTTTTAATTTTAATGTTTTAATTATTTTTT
GACAGAGCCTCGCCTGGGATCCTCTTTTTTCATTCCAACCTTTTCCCCTT
ATTTG

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXTACCGCGAGATTCTAGGGAGTGAAAGATGGCTCAGTCAGAAA
AGAGTTTGCCATGCAAAGACGAGGACCTGAGTTCAATCCTAGCCACTACA
TTAATTTAAAAAAAAATAGCATCCCTATTATTTCAGTTCTGGGAAGGCAG
AGACAGGAGGATCCCTGTGCCTTCTGGTCAGTCAGTCACGCCAACCCGAC
AATCTTCAGTTTCACTGAGAAATCCTGTCTTCAAAACTAAGATGGAAGAT
GATTGTGAAAGCCAATTATCATTGACTTCTTGTTTGCATACTCATATGCA
TGCGTGAACATGCACACACACACAGAGAATTGTACAAAAATAGAGATGAA
GAATATAAAACTTGCATAGCCAGTTTTCCTGTTATGTTCAATCTTTTTAA
GACCATTAGGAAGATGCTCCTAATAGTAATATCTCTCTATTAATATTACT
AAACAGGCATACTTATAGCATCACCAGTAGATGTAAGTGACACAAAAGCA
ACCCTAAATTGCATACCAACATGGCTTTCATCATGATGAGTGACATATGA
TTTTTTCCCCCTTACTCATTCTTCATGTCCCCTTCTGATCGCTTTGGGGT
TATGCTTATTTCGGTATTGGCCAACATTGACAATTCTGGCTCCTTTTTCT
TCTGGGGCTACTACATCCAGGTATCACCACTTTTATCCTTTTTT

Query= MSMg01no418_e13.b1 MSMg01no418_e13.b1 CHROMAT_FILE:
MSMg01no418_e13.b1 PHD_FILE: MSMg01no418_e13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:37:26 2005
         (522 letters)



>mm_chr1_161189432_161190353
          Length = 922

 Score =  971 bits (502), Expect = 0.0
 Identities = 514/518 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcttgcatctatcttgcatgtcttttttgaatatttagaaatccagctagagaaac 64
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttgcatctatgttgcatgtcttttttgaatatttagaaatccagctagagaaac 264

                                                                       
Query: 65  aatatactgtgatttgttttcagaagattttagattattgatccagttaaatatttaaca 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aatatactgtgatttgttttcagaagattttagattattgatccagttaaatatttaaca 324

                                                                       
Query: 125 cactggttcagactttttttggatgcttatatgaaattttctacaagagcttttgatgga 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cactggttcagactttttttggatgcttatatgaaattttctacaagagcttttgatgga 384

                                                                       
Query: 185 agtttgttttaatttttttattgtcaaaacttggtgacctctttttctgatactacctat 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agtttgttttaatttttttattgtcaaaacttggtgacctctttttctgatactacctat 444

                                                                       
Query: 245 aatgtttgttttttattttttattcttgactatttctttaaagggatatgtcagttttat 304
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 445 aatgtttgttttttattttttattcttgactagttctttaaagggatatgtcagttttat 504

                                                                       
Query: 305 aaattttatcccaaggattaacttttgactcttccctgtggtgatcttctgccctttatt 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 505 aaattttatcccaaggattaacttttgactcttccctgtggtgatcttctgtcctttatt 564

                                                                       
Query: 365 accactcccttgctgcttggctttttgtttctcgtgttctgctctggatgtgctttttat 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 accactcccttgctgcttggctttttgtttctcgtgttctgctctggatgtgctttttat 624

                                                                       
Query: 425 gtagactatcaggcagggggttatggttgtacttggttctttttgtcttagctacatcaa 484
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 625 gtagactatcaggcagggggttatggttgtacttggttctttttgttttagctacatcaa 684

                                                 
Query: 485 atggttttgaattgtactttatatggaactattttaaa 522
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 685 atggttttgaattgtactttatatggaactattttaaa 722


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 522
Length of database: 922
Length adjustment: 10
Effective length of query: 512
Effective length of database: 912
Effective search space:   466944
Effective search space used:   466944
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)