Query= MSMg01no419_g18.b1 MSMg01no419_g18.b1 CHROMAT_FILE:
MSMg01no419_g18.b1 PHD_FILE: MSMg01no419_g18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:38:57 2005
(333 letters)
>mm_chr1_16324787_16325518
Length = 732
Score = 592 bits (306), Expect = e-173
Identities = 326/335 (97%), Gaps = 5/335 (1%)
Strand = Plus / Plus
Query: 1 gcaccttcagcaccacaaaagatcccacaactgtgtagagccaggaaggaatgacgagct 60
|||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||
Sbjct: 201 gcaccttcagcaccacaaaagatc---caactgtgtagagccagggaggaatgacgagct 257
Query: 61 gctgcaaagaggcataagcacatttttcataatagtggaagcagctggtgcacagctgtc 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 gctgcaaagaggcataagcacatttttcataatagtggaagcagctggtgcacagctgtt 317
Query: 121 gacctggaaaggaggaatcacatgtacaactaaaatcaacacatttttctatatgaaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 318 gacctggaaaggaggaatcacatgtacaactaaaatcaacacatttttctaaatgaaaat 377
Query: 181 tatttcccaacagtcttgattaaaacatttaaaagatgctgtgagtttaatattattttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 tatttcccaacagtcttgattaaaacatttaaaagatgctgtgagtttaatattattttc 437
Query: 241 cagaaggagttcttgttttctcaaatattccaataaaaaaa--cttggtttatacttaaa 298
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 438 cagaaggagttcttgttttctcaaatattccaataaaaaaaaacttggtttatacttaaa 497
Query: 299 anaatgatagtactatatatagttgtttttctaat 333
| |||||||||||||||||||||||||||||||||
Sbjct: 498 aaaatgatagtactatatatagttgtttttctaat 532
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 333
Length of database: 732
Length adjustment: 9
Effective length of query: 324
Effective length of database: 723
Effective search space: 234252
Effective search space used: 234252
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no419_g18.g1 MSMg01no419_g18.g1 CHROMAT_FILE:
MSMg01no419_g18.g1 PHD_FILE: MSMg01no419_g18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:38:57 2005
(471 letters)
>mm_chr1_16492748_16493618
Length = 871
Score = 586 bits (303), Expect = e-171
Identities = 315/319 (98%), Gaps = 1/319 (0%)
Strand = Plus / Minus
Query: 1 aggtggattattaagggggagaaatgagccgtttggggccagattggcttcaggaccctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 aggtggattattaagggggagaaatgagccgtttggggccagattggcttcaggaccctc 259
Query: 61 attttccatgtccgaagctcctcgaactcctttttcctcccttaaatattattgcccctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 attttccatgtccgaagctcctcgaactcctttttcctcccttaaatattattgcccctt 199
Query: 121 acattaatcactgtgggaagactcagtctaatggtgagatggcataagatggcataatga 180
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 198 acattaatcactgtgggaagactcagtctaatggtgagatggcataatatggcataatga 139
Query: 181 gtgaggagatgacttgagcagcagcatgcctgtatccatttccttcttcttgacagtgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 gtgaggagatgacttgagcagcagcatgcctgtatccatttccttcttcttgacagtgga 79
Query: 241 tgggatgtgttctagctgctggtcctccaaccttgacttccctgtgtactgtactatgtg 300
||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 tgggatgtg-accagctgctggtcctccaaccttgacttccctgtgtactgtactatgtg 20
Query: 301 ctggaagtgtgagccaaaa 319
|||||||||||||||||||
Sbjct: 19 ctggaagtgtgagccaaaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 471
Length of database: 871
Length adjustment: 10
Effective length of query: 461
Effective length of database: 861
Effective search space: 396921
Effective search space used: 396921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
