Query= MSMg01no419_i07.b1 MSMg01no419_i07.b1 CHROMAT_FILE:
MSMg01no419_i07.b1 PHD_FILE: MSMg01no419_i07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:39:05 2005
(247 letters)
>mm_chr1_180442275_180442921
Length = 647
Score = 441 bits (228), Expect = e-128
Identities = 242/247 (97%)
Strand = Plus / Plus
Query: 1 agcatcagggatggaagggtgactagacatgtcaaagagaaccaacatctatctggcagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agcatcagggatggaagggtgactagacatgtcaaagagaaccaacatctatctggcagc 260
Query: 61 cagtgctggccccacctacgacagcccagtaaatgatagcccattcttatttttataaat 120
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 261 cagtgctggccccacctacgacagcccagtaaacgagagcccattcttatttttataaat 320
Query: 121 gccatcactgtgaggagggagtcaggagtgtgacaaatgcnatgtcttcatgctccatca 180
|||||||||||||||||||||||||||||||||||||||| | | |||||||||||||||
Sbjct: 321 gccatcactgtgaggagggagtcaggagtgtgacaaatgctaagccttcatgctccatca 380
Query: 181 cacagagtaaagagctgattctcaaacggtaaatcatgaaactgctgcttaagcacatac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cacagagtaaagagctgattctcaaacggtaaatcatgaaactgctgcttaagcacatac 440
Query: 241 agttcag 247
|||||||
Sbjct: 441 agttcag 447
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 647
Length adjustment: 9
Effective length of query: 238
Effective length of database: 638
Effective search space: 151844
Effective search space used: 151844
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no419_i07.g1 MSMg01no419_i07.g1 CHROMAT_FILE:
MSMg01no419_i07.g1 PHD_FILE: MSMg01no419_i07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:39:05 2005
(285 letters)
>mm_chr1_180528497_180529181
Length = 685
Score = 482 bits (249), Expect = e-140
Identities = 279/296 (94%), Gaps = 11/296 (3%)
Strand = Plus / Minus
Query: 1 agtgcaaaagagtttcacgctgatccaatccaattgagaaaactcaatgagagattctag 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 agtgcaaaagagtttcacactgatccaatccaattgagaaaactcaatgagagattctag 338
Query: 61 agtcttcaaaggacatgggatgcaggaaagctggacacaataatttgggcaggcaggaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 agtcttcaaaggacatgggatgcaggaaagctggacacaataatttgggcaggcaggaac 278
Query: 121 agagacagagggaatgtttggaccatttatacagtaggtaaatgggagcgatggtacggc 180
||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||
Sbjct: 277 agagacagagggaatgtttggaccatttatacagtaggtaaatgggagcaatggtatggc 218
Query: 181 tcagtggtcaagtatgt-----------atgaatacctggatccaatccccagtactgaa 229
||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 217 tcagtggtcaagtatgtgcctagcatgcatgaatacctggatccaatccccagtactgaa 158
Query: 230 aaggaggcagaagagaaggaggtantagaggaggagagagaggggagaggaaggac 285
|||||||||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 157 aaggaggcagaagagaaggaggaaggagaggaggagagagaggggagaggaaggac 102
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
