ACATACGTTATCAGGTGACAAAGAGAGAACAACTNNNTTTTTTACCCCCA
CCCCACCCAGACGCCATGTGAGTGTATTACTCCCCCCCGCACCGCTGTAT
CCGTACACAAGAACCGCCGCAGAACACCCCAACACTCGTCCCGATATTAT
GAATATTCTACCCTTCATACGCATATATATTCACTTATAATCTAAAATGA
GGGGAAGATAATGGTCTAAGTCGGGAGATAGCTTATGTAATGCCATGTCT
GGCGAACGATTATTATTTGGGTTTCATTGTGTATGTAACGCATGTGCGGC
GCATCGCGATATCACATTTATATCGCACTACGCCTTGTAGCTTCTTCGAA
TCTCTGCCTCTACCGCATCTCTGCCTTCCACGTTCAGTTTACGGTTAGAT
AGTTACAATAACCTACTACATTTAATATCCGTATGTATCCGTTACACGAA
CGCTATCAATACATACTATAGCGCTAAACGCGACATAGACTCGCACGCTC
GTCGCCAAGACGCATTAAACTAGAAACAATACGAGGCGTACTACCACTCA
CAGTCCCAGAGTATGCGAATATATCAGCGAGAATCCCGCCAATTGACGAG
TATTTCTCATAGACGCTCATATTATCCCTCGCTACGCCGTCGTTACTATT
TAGCTAACATTGGTTATGACGACTCAGAGAATATACCTCCTACTCTCATC
TATTACGACCACGTACTAATATTAGTCATAGTCCCTGCGGTCGCATCTGT
ACTCAATACACAAATATAACTCTATTGGCTCCCATACCTACAGACATACA
ATATAACCGTCATTCTATGATCTTCCAATACGAGGTCCACCCTTACGAAT
GTATTATATATTCAACCTTACATACAACGAATCAATCATACTGCACTAAT
CACGATACGCTCTAACGGCATAGAAGATAAAGATCACCGACTAAACGTCT
CACTCTATAATACCTTATATCCCACCAGCGAAAATATATAGCCGCGTATC
ATTTTGAACCCGTGTCTCGCTCGCCCCAGGTTGTGACTAATACATTATTG
CACATGGTGCGATCAACCTTAATGTCATTAGTGTCCTAACGTCACTACCG
CCAGCAACCTTTGTGCGCGTACTGCTGGTCGCTCACTAGACGTTGTATAT
AGTG

ATGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXAGTTTCTCAGTGCAAACAGAACAGCTTCT
TAACTTGTAACATGTCACATGCCTCAGTCACATTTGAGCATTGTCAGGAT
GGGACGTTCGTAATAAAGCCACAGATTCACTCAATTTTCTAAAACAAACA
TTTGAAAGCATGTTTAGATCAGAGAATCAGATGTGAATTCTTTTCAACAA
TTGGCATGTACTTCCTACTCCCATAACAACAACAGTGACAATTCTGTCTG
AATGAAATAGAACTAGCCAGTCATTTAAAATGAAGCCCAATGGGCTGAGG
AGATGGCTCAGCTGTTAAGGGCATTTGCTACTCTTTGGTAGGAGTCTAGT
TCAGTTCCCAGAACCTATGTCAGAAGAGTCTGCACCTCTAGCTCCACGGC
ATCATCTAGCCTGTGCAGGCACTGGCACGTATACCCACATGGATGCGGGG
CAGTGGGCATGGGGAATAAAGGTGGCTGTGGGAAGCCACTGAATCCAGCC
TGCCAGGGGGAGGCCAGAGATAACAGGTTCTCAGTCTCAAGCATCTCAGA
CGCTGCTGGACACCGCGGAAGAGCTGAGAACAAAGTAGGGGCCCCAAGGG
TGGCTCGGTCATCCCAGAGCCTTAGGGAAGAGAGGGCCAGGGTGAGAGGG
AGTTCTGGGTGTCTCCCACAAGGCGGGAAGTCATTGGCCCTGTCCGTGGC
TGAAGCCCTGGAN

Query= MSMg01no421_e08.g1 MSMg01no421_e08.g1 CHROMAT_FILE:
MSMg01no421_e08.g1 PHD_FILE: MSMg01no421_e08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:41:23 2005
         (588 letters)



>mm_chr1_6390230_6391220
          Length = 991

 Score = 1065 bits (551), Expect = 0.0
 Identities = 580/591 (98%), Gaps = 3/591 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   agtttctcagtgcaaacagaacagcttcttaacttgtaacatgtcacatgcctcagtcac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtttctcagtgcaaacagaacagcttcttaacttgtaacatgtcacatgcctcagtcac 260

                                                                       
Query: 61  atttgagcattgtcaggatgggacgttcgtaataaagccacagattcactcaattttcta 120
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 261 atttgagcattgtcaggatgggacgtttgtaataaagccacagattcactcaatttttta 320

                                                                       
Query: 121 aaacaaacatttgaaagcatgtttagatcagagaatcagatgtgaattcttttcaacaat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaacaaacatttgaaagcatgtttagatcagagaatcagatgtgaattcttttcaacaat 380

                                                                       
Query: 181 tggcatg---tacttcctactcccataacaacaacagtgacaattctgtctgaatgaaat 237
           || ||||   ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgacatgatgtacttcctactcccataacaacaacagtgacaattctgtctgaatgaaat 440

                                                                       
Query: 238 agaactagccagtcatttaaaatgaagcccaatgggctgaggagatggctcagctgttaa 297
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 441 agaactagccagtcatttaaaatgaagcccagtgggctgaggagatggctcagctgttaa 500

                                                                       
Query: 298 gggcatttgctactctttggtaggagtctagttcagttcccagaacctatgtcagaagag 357
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gggcatttgctactcttcggtaggagtctagttcagttcccagaacctatgtcagaagag 560

                                                                       
Query: 358 tctgcacctctagctccacggcatcatctagcctgtgcaggcactggcacgtatacccac 417
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 561 tctgcacctctagctccacggcatcatctagcctgtgcaggcactggcacgtatacctac 620

                                                                       
Query: 418 atggatgcggggcagtgggcatggggaataaaggtggctgtgggaagccactgaatccag 477
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atggatgcggggcagtgggcatggggaataaaggtggctgtgggaagccactgaatccag 680

                                                                       
Query: 478 cctgccagggggaggccagagataacaggttctcagtctcaagcatctcagacgctgctg 537
           ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 681 cctgccaggggaaggccagagataacaggttctcagtctcaggcatctcagacgctgctg 740

                                                              
Query: 538 gacaccgcggaagagctgagaacaaagtaggggccccaagggtggctcggt 588
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gacaccgcggaagagctgagaacaaagtaggggccccaagggtggctcggt 791


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 588
Length of database: 991
Length adjustment: 10
Effective length of query: 578
Effective length of database: 981
Effective search space:   567018
Effective search space used:   567018
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)