ACTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAGAATCCGC
GGAATTCTCAACTGATGACTACTGAATGGCTGAGAAGCACCTAAAAAAAT
GTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGA
TTCCACCTCACACCAGTCAGTATGGCTAGGATCAAAAATTCAGGTGACAG
CAGATGCTGGCAAGGATGTGGAGAAAGAGGAACATTCCTCCATTGCTGGT
GGGATTGCGAGCTGGTACAACCACTCTGGAAATTACTCTAGTGGTTCCTC
AGAAAACTGGACATAGTACTACCATTTTTATTCAGCAATACCTCTCCTGG
GTATATACCCAGAAGATGTTGTAACTGGTAAAAAGGACACATGCTCCACT
ATGTTCATAGCAGCCCTATTTATAATATCCAGAAGCTGGAAAGAACCCAG
ATGTCCCTCAAGAGAGGAATGGATAAAGAAAATGTGGTAAATTTACACAA
TGGAGTACTACTCAGCTATTAAAAACAATGAATTTATGAAATTCTTGGAC
AAATGGATGTATCTGGAGGATATCGTCCTGAGTGAGGTAACCCAATCACA
AAAGAAGTCACTTGATCTGCACTCACTGATAAGTAGATATTAGCCCAGAA
GCTCAGAATCCTTATTATAATGTGGGAACAAAATACCCATGGAAGGAGAA
ACATAGACAAAATTTGGAGCACAGACTGAAAGAATGACCATCCAGAGACT
GCTTCACTTGGG

NCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCTCTAGGAGGACAACCTCCTTGCCTC
ACTCAAGGCTACAGTGGACTCCCTTGGCAAAGATGCACAGTTGTATGCCT
CGGGCTTTACAGAATATGTCTATAGGTTCAAGTTCCAATTACCTGCCAAA
GTACCTGGCTTGCTAAGTATCAGTAGATACTCCTTCCCTGACTTTCTTTT
TTCCACAATTGTTAGTGTTAGTCTTTCTTTGTCTCAGACTCTTCTGCCTT
GGTGTTTCTAGAGGGGCACAATGTATAGATTCTTTTTGCTCTGTCAGAGT
GAGAGCATCTTGTATTTCCTTGCTAACTCCTCAGCATCTTCTGCATCCCA
TGTAATCTTTTAAAATTCTACACATTTCTGAGGAACCACGGCCAAGTCAT
CCCAAAATGTGCCCTATCATCTAGCTTTATCCCTTATCCTGTCCCCAGCA
CAGCCTCAGAACACAGACTCTTCTAAGAGTCTGACGTATGGTGTCTTAAC
TTGTGATGGATAGAGTTTTGTACGTGTAATATCTGTTTTCTTTTCAGTTC
AGATCACAGCCCTGGAAAGAAAAGAGCACTTCTGCCTTATGTGATCCAAA
TCCTTAACTTCCTCAATTTTAATAAATAAATAAATAAATAAATAAATTAA
ATAAATAAATAAATTAATAAATAAAGGCTTTTCTTGTGTGGCTAAAAAGG
CCCCCGGTGGCCC

Query= MSMg01no421_e17.g1 MSMg01no421_e17.g1 CHROMAT_FILE:
MSMg01no421_e17.g1 PHD_FILE: MSMg01no421_e17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:41:25 2005
         (546 letters)



>mm_chr1_61057882_61058826
          Length = 945

 Score = 1025 bits (530), Expect = 0.0
 Identities = 542/546 (99%), Gaps = 1/546 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctctaggaggacaacctccttgcctcactcaaggctacagtggactcccttggcaaagat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctctaggaggacaacctccttgcctcactcaaggctacagtggactcccttggcaaagat 260

                                                                       
Query: 61  gcacagttgtatgcctcgggctttacagaatatgtctataggttcaagttccaattacct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcacagttgtatgcctcgggctttacagaatatgtctataggttcaagttccaattacct 320

                                                                       
Query: 121 gccaaagtacctggcttgctaagtatcagtagatactccttccctgactttcttttttcc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gccaaagtacctggcttgctaagtatcagtagatactccttccctgactttcttttttcc 380

                                                                       
Query: 181 acaattgttagtgttagtctttctttgtctcagactcttctgccttggtgtttctagagg 240
           ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 381 acaattgttagtgttagtctttctttgtcacagactct-ctgccttggtgtttctagagg 439

                                                                       
Query: 241 ggcacaatgtatagattctttttgctctgtcagagtgagagcatcttgtatttccttgct 300
           ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ggcacaatggaaagattctttttgctctgtcagagtgagagcatcttgtatttccttgct 499

                                                                       
Query: 301 aactcctcagcatcttctgcatcccatgtaatcttttaaaattctacacatttctgagga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 aactcctcagcatcttctgcatcccatgtaatcttttaaaattctacacatttctgagga 559

                                                                       
Query: 361 accacggccaagtcatcccaaaatgtgccctatcatctagctttatcccttatcctgtcc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 accacggccaagtcatcccaaaatgtgccctatcatctagctttatcccttatcctgtcc 619

                                                                       
Query: 421 ccagcacagcctcagaacacagactcttctaagagtctgacgtatggtgtcttaacttgt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ccagcacagcctcagaacacagactcttctaagagtctgacgtatggtgtcttaacttgt 679

                                                                       
Query: 481 gatggatagagttttgtacgtgtaatatctgttttcttttcagttcagatcacagccctg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gatggatagagttttgtacgtgtaatatctgttttcttttcagttcagatcacagccctg 739

                 
Query: 541 gaaaga 546
           ||||||
Sbjct: 740 gaaaga 745


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 546
Length of database: 945
Length adjustment: 10
Effective length of query: 536
Effective length of database: 935
Effective search space:   501160
Effective search space used:   501160
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)